Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3294 |
Symbol | pyrB |
ID | 4625780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 4066632 |
End bp | 4067567 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639798404 |
Product | aspartate carbamoyltransferase catalytic subunit |
Protein accession | YP_944580 |
Protein GI | 119946900 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.773416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.168026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATC CATTATATCA AAAAAATATT ATCTCCATCT CCGACCTTTC TCGTGCAGAG CTTGAACTTA TTCTAACAAC AGCTCAATCA TTAAAACACA ACCCGCAACC CGAGCTGTTA AAAAATAAAG TTATTGCCAG TTGTTTCTTT GAAGCGTCAA CACGAACCCG CCTTTCATTT GCAACAGCAG TGCAGAGGTT GGGAGGAACT GTGATTGGTT TTGATAATGC AGGAAATACC TCATTAGCAC AAAAAGGGGA AACACTGGCA GATTCAGTTA AAATAATCGC TTCTTATGCT GACGCTTTTT TTATACGCCA CCCGCAGGAA GGTGCGGCTC GTTTAGCGGC GGAATTTACC AACATCCCTG TTATCAATGG TGGAGACGGA TCGAATCAAC ATCCTACGCA AACATTATTA GATCTGTTTA CCATTTATGA AACGCAAAAC AGACTCGATA ACCTGAATAT TGCCTTTGTA GGCGATCTAA AATATGGCCG AACAGTGCAC TCATTGGCAC AAGCTTTGTC TTTATTTAAC TGTAATTTCT ATTTTATCGC TCCAGAAGCT TTGGCAATGC CCGACTACAT ACTGGAAGAA CTTAATGAGA AAGGGATCAA TTATTCTGTG CATAGCAGTA TTGAAGAGGT TGTTGATTCA CTCGATGTGT TGTATATGAC AAGGGTGCAA AAAGAACGTT TTGATGAAAC GGAATATCAA CATATTAAAT CCGCATTTTT GTTAAATGCA GATATGTTAG AAAACGTGCG GGAAAACTTA AAAGTACTGC ACCCGTTACC TCGTGTGGAT GAAATTAATA TCAATGTCGA TAAGACACCC TATGCTTATT ATTTTCAACA AGCTCAAAAT GGCATTTATG CACGACAGGC TTTATTGGCT TTATTGTTAA CAAACCATTT CCAAGATCAA GCGTAA
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Protein sequence | MNNPLYQKNI ISISDLSRAE LELILTTAQS LKHNPQPELL KNKVIASCFF EASTRTRLSF ATAVQRLGGT VIGFDNAGNT SLAQKGETLA DSVKIIASYA DAFFIRHPQE GAARLAAEFT NIPVINGGDG SNQHPTQTLL DLFTIYETQN RLDNLNIAFV GDLKYGRTVH SLAQALSLFN CNFYFIAPEA LAMPDYILEE LNEKGINYSV HSSIEEVVDS LDVLYMTRVQ KERFDETEYQ HIKSAFLLNA DMLENVRENL KVLHPLPRVD EININVDKTP YAYYFQQAQN GIYARQALLA LLLTNHFQDQ A
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