| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3291 |
|---|
| Symbol | |
|---|
| ID | 4625777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 4062501 |
|---|
| End bp | 4063292 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639798401 |
|---|
| Product | Cof-like hydrolase |
|---|
| Protein accession | YP_944577 |
|---|
| Protein GI | 119946897 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.242877 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACAAAA TAGCTATTTC AGATCTCGAC GGTACCCTGC TAGGCCCGGA TCATCGCATC
TCAGTAAAAA CAGAAGAAAC AATTCAACGC TGGGTACAAA GTGGCCGAAA ATTTGTGATC
GCAACGGGCA GGCACTATAT CGAAGCAAAA CATTTACAAG AATCCTTAAA TATCCCCATT
TATTTAATCA CTTCAAATGG AGCACGCATT CACAATAAAG AAGGAAAAAT TATTCATCAA
CAGAATTTGC CCAGTAATAT AGCACAAGAG ATTTGCGATA CTGTATTTTC TGATGCAGTG
CAAATAAACC TCTTCACAGA CCAAAACTGG TATGCCAACT ATCCTCTGGC AGAACTTGAT
GGAATGGGAT TAGACGCAGG CTTTAACTGC ATCAAAGCCG ATCTCAGCAA ACTTGATAAA
AGTAATACGA TTAAGATATT TTTCTATGCG GAAGCTGAAT TATTACAACC CGTTTATGAC
TTATTAGCGG CGCGTTACGG TGATAAAATC AACCTCACTT TTTCTTTGAC AAAGTGTCTG
GAGGTGATGT GTGCCAATAC CAATAAAGGT GAAGCCGTTA AAGTCGTGTT AAAAAGAAAA
AGCCTGGAAA TTTCCGATGC CATTGCATTT GGAGATGGTA TGAATGATCT TGAAATGTTA
CTCGCAGTGG CGAAACCTAT CGTAATGGCA AATGCCCAGT ATGCGCTAAA AGAGGCGCTG
CCTAATGTAG AAAAAACGCT TTCATCTAAA GAGCACGGTG TGGCGGTAAT AATGGAACGA
TATTTAACCT AG
|
|---|
| Protein sequence | MYKIAISDLD GTLLGPDHRI SVKTEETIQR WVQSGRKFVI ATGRHYIEAK HLQESLNIPI
YLITSNGARI HNKEGKIIHQ QNLPSNIAQE ICDTVFSDAV QINLFTDQNW YANYPLAELD
GMGLDAGFNC IKADLSKLDK SNTIKIFFYA EAELLQPVYD LLAARYGDKI NLTFSLTKCL
EVMCANTNKG EAVKVVLKRK SLEISDAIAF GDGMNDLEML LAVAKPIVMA NAQYALKEAL
PNVEKTLSSK EHGVAVIMER YLT
|
|---|
| |