Gene Ping_3280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3280 
Symbol 
ID4626313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4047403 
End bp4047792 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content40% 
IMG OID639798387 
Productfumarate reductase, subunit C 
Protein accessionYP_944566 
Protein GI119946886 
COG category[C] Energy production and conversion 
COG ID[COG3029] Fumarate reductase subunit C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.63261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAC GTAAACCTTA TGTGCGTGAA TTACCAATAA ATTGGTGGAT GAAAAACGCT 
TTTTATACAA AATATATGAT TCGCGAAGGC AGTAGTATTT TTATTACCTT ATACAGCCTG
ATATTAACCT GGGGTGTCTT TCGTTTAAGT CAGGGTGAAG CCGCTTTTAA TGCCTGGATG
GCCGCATTAC ACAATCCACT TTCAATTATG CTGCACCTTA TCGCGTTAGC ATTAGCCCTG
TATCATACTG TTACCTGGTT TTCTCTGGCG CCTAAAGCGA TCGCTTTATG GATCAGAGGG
AAAAGATTAC CAGACAAATT TATTATTGCG GGTCATTACG GCGCATTCGT TGCAGTGACT
ATTTTCTGCC TGATAATTAT CACCCTGTAA
 
Protein sequence
MSKRKPYVRE LPINWWMKNA FYTKYMIREG SSIFITLYSL ILTWGVFRLS QGEAAFNAWM 
AALHNPLSIM LHLIALALAL YHTVTWFSLA PKAIALWIRG KRLPDKFIIA GHYGAFVAVT
IFCLIIITL