Gene Ping_3273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3273 
Symbol 
ID4626306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4039310 
End bp4040875 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content41% 
IMG OID639798380 
Productintegral membrane protein MviN 
Protein accessionYP_944559 
Protein GI119946879 
COG category[R] General function prediction only 
COG ID[COG0728] Uncharacterized membrane protein, putative virulence factor 
TIGRFAM ID[TIGR01695] integral membrane protein MviN 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAAAA AATTACTGAG ATCAGGTTTG ATCGTAAGCT CTATGACATT GATTTCTAGA 
ATTTTAGGTC TGCTAAGAGA TGTCGTCATA GCAAACTTGA TGGGAGCGGG AGCTGCCGCC
GATGTGTTTT TCTTTGCCAA TAAAATTCCT AATTTTTTAC GGCGTTTATT TGCTGAAGGT
GCGTTTGCAC AAGCATTTGT GCCGGTCTTG ACGGAATACG AAAAACAACA CTCTTTTGAT
GAAGTTAAAA AATTAGTTGC CGCTGTCTCC GGCACCTTGG GAACCATTAT TACTATTATT
ACTATTCTCG GTGTGTTGGG ATCTTCTGTG ATCACCGCAT TATTCGGTTT TGGCTGGTTT
TTAGAATGGT GGAATGGCGG CCCGGATGGA CAAAAGTTTG AGCTTGCCTC TTTTATGTTA
AAAATAACCT TTCCCTATTT ATGGTTTATT ACCTTCACCG CTTTATCCGG GGCAATTTTA
AATACTCTGG GTAAATTTGC TGTCGCCGCT TTTACGCCCG TCTTTTTGAA TGTGGCAATT
ATCAGTTGTG CAATTTTTGT CTCCCCGCAT TTGCAACAAC CAGAAATAGG GTTAGCAATA
GGCGTATTTT TGGGTGGGGC GATCCAGTTT CTTTTCCAGA TCCCTTTTTT ACATAAAGAA
AAACTATTGG TTAAGCCTAC TTGGAATTGG CACCATCCCG GTGTTGTAAA AATCAGAGTC
TTAATGATTC CGGCATTATT TGGGGTATCT GTTAGCCAAA TTAATTTATT GCTTGATACT
TTTATTGCCA GTTTTCTGCA AACGGGATCA ATCAGTTGGT TATATTACTC GGATCGTTTA
CTGGAATTTC CATTAGGGTT ATTTGGTATC GCTATCGCAA CGGTTATTTT ACCGAGCCTG
TCCTCATCTC ACGTCACTAA ATCAATCGAT GATTTTGCTA AAACGCTGGA TTGGGGGATG
CGTATGGTCT GTATCTTAGG TTTCCCTGCG ATGTTAGGGT TGATTATACT GGCGGAGCCT
ATGCTGCGTG TTTTATTTAT GCGTGGTGAA TTTGTTGCCC ACGATGTTGC AATGGCATCA
ATGAGCTTAT GGGCATACGG CAGTGGGTTA TTGAGTTTTA TGATGGTTAA AATATTAGCA
CCCGGATACT ACGCACGCCA GGATACAAGA ACGCCAGTAA AATACGGGAT GATTGCTATG
GGCAGTAATA TGGTTTTGAA CATTATTTTT GCTATCCCCT ATGGTTACGT CGGTTTGGCT
ATTGCAACCT CAATTTCAGC GACTTTAAAT GCAGGCTTGT TATGGTTTGG TTTATACCAA
AAAGGTATTT ACCAAAGACA AAAAGACAGT GTGTCGGTAC TACTGCGAAT TATCATTGCG
GGTTTAGTGA TGGCCGCAGG TTTAGTTGCC TTTAATCCAG CATTATCAGA GTGGAGTCAA
CTGTCGTGGC TGGAAGCTGC ATTAAAACTG TTTTATTTAA TCGTGGCAGG TGCAGTCTTG
TATTTGTTTG CTTTAGGGTT GACCGGATTA CGCTTTAGGC ATTTTCAGAT AAGAATGGCT
AAATGA
 
Protein sequence
MSKKLLRSGL IVSSMTLISR ILGLLRDVVI ANLMGAGAAA DVFFFANKIP NFLRRLFAEG 
AFAQAFVPVL TEYEKQHSFD EVKKLVAAVS GTLGTIITII TILGVLGSSV ITALFGFGWF
LEWWNGGPDG QKFELASFML KITFPYLWFI TFTALSGAIL NTLGKFAVAA FTPVFLNVAI
ISCAIFVSPH LQQPEIGLAI GVFLGGAIQF LFQIPFLHKE KLLVKPTWNW HHPGVVKIRV
LMIPALFGVS VSQINLLLDT FIASFLQTGS ISWLYYSDRL LEFPLGLFGI AIATVILPSL
SSSHVTKSID DFAKTLDWGM RMVCILGFPA MLGLIILAEP MLRVLFMRGE FVAHDVAMAS
MSLWAYGSGL LSFMMVKILA PGYYARQDTR TPVKYGMIAM GSNMVLNIIF AIPYGYVGLA
IATSISATLN AGLLWFGLYQ KGIYQRQKDS VSVLLRIIIA GLVMAAGLVA FNPALSEWSQ
LSWLEAALKL FYLIVAGAVL YLFALGLTGL RFRHFQIRMA K