Gene Ping_3266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3266 
Symbol 
ID4626299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4031898 
End bp4032671 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content39% 
IMG OID639798373 
Productputative lipoprotein 
Protein accessionYP_944552 
Protein GI119946872 
COG category[R] General function prediction only 
COG ID[COG4105] DNA uptake lipoprotein 
TIGRFAM ID[TIGR03302] outer membrane assembly lipoprotein YfiO 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TCCTCAGACT AATAACCTCC TCTCTTATGA TTGTTTTATT AAGCACCGGT 
TGTTCATCTA AAAAAGCTGA AAAACCTAAA GTGGATGATA AACCACCCAT GGTACTTTAT
GAACAAGCAA AACAAGCATT AGAGTCTGCA AGTTTTGAAA AAGCATCTGA TATTTTAGAG
GCCTTGGATA CCCGTTACCC CTTTGGCCCA CATTCAGATC AGGTGCAATT GGATCTTATT
TACGCTTATT ACAAACGTGG TGAAACAGCC TTTACACTGG CCAACATTGA CCGGTTTCTT
CGCCTGAACC CAACACATCC CGACCTTGAT TATATTTATT ATATGCGTGG TTTAACCTAT
ATCAGCGCAG ATCAGCAATT TTTCCAGGAC TTGTTTGGTA TCGATCGTTA TAACCGAGAT
CCAAACAATG CAATCCAAGC CTTCAAAGAC TTATCAAGAA TTATCAAATA TTACCCAAGC
AGCGAATATG CTGTCGATGC GCAACAAAGG ATAATAGATC TAAAAGATCG TTTAGCACGC
TATGAAATTG GGATTGCGCA GTGGTATCTC AAACGTGAAG CTTATATTGC CGCCATTAAT
CGTTGCAAAA TAGTCTTAAA TAATTACCCC GATATGCCGG CTGTTGAACA GGCGCTAGAG
ATTATGATTG CAAGTTATAA TGTCTTAGGT ATTGAAGAGC CTAAAATGAA TGCCTTGGCC
GTATTAAAAT TAAACTACCC GAAAAACCTG ACGCTGATAG ATGTTAAACC TTAG
 
Protein sequence
MKKILRLITS SLMIVLLSTG CSSKKAEKPK VDDKPPMVLY EQAKQALESA SFEKASDILE 
ALDTRYPFGP HSDQVQLDLI YAYYKRGETA FTLANIDRFL RLNPTHPDLD YIYYMRGLTY
ISADQQFFQD LFGIDRYNRD PNNAIQAFKD LSRIIKYYPS SEYAVDAQQR IIDLKDRLAR
YEIGIAQWYL KREAYIAAIN RCKIVLNNYP DMPAVEQALE IMIASYNVLG IEEPKMNALA
VLKLNYPKNL TLIDVKP