Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3266 |
Symbol | |
ID | 4626299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 4031898 |
End bp | 4032671 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639798373 |
Product | putative lipoprotein |
Protein accession | YP_944552 |
Protein GI | 119946872 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA TCCTCAGACT AATAACCTCC TCTCTTATGA TTGTTTTATT AAGCACCGGT TGTTCATCTA AAAAAGCTGA AAAACCTAAA GTGGATGATA AACCACCCAT GGTACTTTAT GAACAAGCAA AACAAGCATT AGAGTCTGCA AGTTTTGAAA AAGCATCTGA TATTTTAGAG GCCTTGGATA CCCGTTACCC CTTTGGCCCA CATTCAGATC AGGTGCAATT GGATCTTATT TACGCTTATT ACAAACGTGG TGAAACAGCC TTTACACTGG CCAACATTGA CCGGTTTCTT CGCCTGAACC CAACACATCC CGACCTTGAT TATATTTATT ATATGCGTGG TTTAACCTAT ATCAGCGCAG ATCAGCAATT TTTCCAGGAC TTGTTTGGTA TCGATCGTTA TAACCGAGAT CCAAACAATG CAATCCAAGC CTTCAAAGAC TTATCAAGAA TTATCAAATA TTACCCAAGC AGCGAATATG CTGTCGATGC GCAACAAAGG ATAATAGATC TAAAAGATCG TTTAGCACGC TATGAAATTG GGATTGCGCA GTGGTATCTC AAACGTGAAG CTTATATTGC CGCCATTAAT CGTTGCAAAA TAGTCTTAAA TAATTACCCC GATATGCCGG CTGTTGAACA GGCGCTAGAG ATTATGATTG CAAGTTATAA TGTCTTAGGT ATTGAAGAGC CTAAAATGAA TGCCTTGGCC GTATTAAAAT TAAACTACCC GAAAAACCTG ACGCTGATAG ATGTTAAACC TTAG
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Protein sequence | MKKILRLITS SLMIVLLSTG CSSKKAEKPK VDDKPPMVLY EQAKQALESA SFEKASDILE ALDTRYPFGP HSDQVQLDLI YAYYKRGETA FTLANIDRFL RLNPTHPDLD YIYYMRGLTY ISADQQFFQD LFGIDRYNRD PNNAIQAFKD LSRIIKYYPS SEYAVDAQQR IIDLKDRLAR YEIGIAQWYL KREAYIAAIN RCKIVLNNYP DMPAVEQALE IMIASYNVLG IEEPKMNALA VLKLNYPKNL TLIDVKP
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