| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3265 |
|---|
| Symbol | |
|---|
| ID | 4626298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 4030732 |
|---|
| End bp | 4031700 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639798372 |
|---|
| Product | pseudouridine synthase, RluA family protein |
|---|
| Protein accession | YP_944551 |
|---|
| Protein GI | 119946871 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAG AGTTAAACCT TAGCGCAGAA GTCACTGATC AACAACTCGG CTTTCGATTA
GATCAGGCAG TAGCGTCACT ATTCCCTGAC TATTCCCGTA CGCGAATTAA AGAATGGATT
TTGGCTGATA TGGTCAAAAT TGATGGCGAA GTCATTAATC GTCCTCGCGA AAAAGTTTAT
ACCGGGCAAA CGGTAGGAGT TCAAGCTGTA CTCGAAGATG AAGTCGTTTT TAAAGCGCAA
AAGATCAAAT TAGAGATCGT TTATGAAGAT GACGATATTT TAGTGATTAA CAAACCGGCC
GGTTTAGTTG TGCATCCCGG TGCAGGTAAT CCCGATGGTA CTGTTCTAAA TGCACTGTTG
CATCATTTTC CGCAAATTAT TGAAGTACCT AGAGCGGGTA TTGTGCATCG TTTAGATAAA
GACACAACTG GACTGATGGT TGTGGCCAAA ACGGTACCGG CACAAACACA TTTAGTGACC
AGCTTACAAG CGCGTGAAAT TACTCGTGAG TATGAAGCGA TTGCCATGGG AGGCTTTACT
GCTGGTGGAT TTGTCGAAGC TCCAATTGGG CGAGATAAAG TACATCGTGT TAAAATGGCG
GTTAATTCAA CGGGTGGTAA ACATGCTCTG ACTCATTATC GTGTCTCTGA GAAATATCGT
GCTCATACAC GGTTGCGATT ACGCCTTGAA ACCGGTCGTA CACACCAAAT TCGAGTCCAT
ATGATGCATA TAGGTCATGT ACTGACAGGT GATCCGGTTT ATGGTGGTCG TCCTCGTCCA
CCTAAAGGTG CTTCCGAGGC ATTATTAGCA ACGTTACGTG GTTTTAGACG TCAGGCATTA
CATGCAACTA TGTTACGTTT AGCGCACCCT ATTACCGGTG AAATAATGGA ATGGCATGCG
CCACTGCCTG CAGATATGGC CGAATTAGCA GAGGCGTTAC GCCAAGATAT GATTCTGCAC
GGTGGTTAA
|
|---|
| Protein sequence | MSQELNLSAE VTDQQLGFRL DQAVASLFPD YSRTRIKEWI LADMVKIDGE VINRPREKVY
TGQTVGVQAV LEDEVVFKAQ KIKLEIVYED DDILVINKPA GLVVHPGAGN PDGTVLNALL
HHFPQIIEVP RAGIVHRLDK DTTGLMVVAK TVPAQTHLVT SLQAREITRE YEAIAMGGFT
AGGFVEAPIG RDKVHRVKMA VNSTGGKHAL THYRVSEKYR AHTRLRLRLE TGRTHQIRVH
MMHIGHVLTG DPVYGGRPRP PKGASEALLA TLRGFRRQAL HATMLRLAHP ITGEIMEWHA
PLPADMAELA EALRQDMILH GG
|
|---|
| |