Gene Ping_3260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3260 
Symbol 
ID4626330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4023238 
End bp4024809 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content41% 
IMG OID639798367 
ProductABC transporter ATP-binding protein, two fused 
Protein accessionYP_944546 
Protein GI119946866 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0410854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTTG GTGCAAAACC TTTATTCGAA AATATCTCAG TTAAATTTGG TAATGGTAAC 
CGTTATGGCC TGATTGGTGC CAACGGTTGT GGTAAATCAA CGTTCATGAA AATTTTAACT
GGCGACTTAG AGCCAAGTGC CGGTAATGTT GCCAAAGATC CTAACGAACG TATTGCAAAA
CTGCATCAAG ACCAGTTCGC TTTCGAAGAA TTCTCGGTAC TTGATACCGT ATTAATGGGT
CACAAAGAGA TGTGGGCTGT GATGGCTGAA CGTAATCGCA TCTACAGTCT GCCTGAAATG
AGCGAAGAAG ACGGCATGAA AGTTGCCAAT CTTGAAACTG AATTCGCCGA GATGGACGGT
TATACTGCCG ACGCCCGCGC CGGAGAATTA TTACTGAGCG TTGGTATCCC GCTGGACTTG
CACTACGGCT TAATGTCAGA AGTAGCACCG GGTTGGAAAC TGCGTGTACT GCTTGCACAA
GTCTTATTCT CAAATCCAGA AATTATGTTA CTTGATGAGC CAACCAATAA CCTGGACATT
GATACTATCC GCTGGTTGGA AGACGAGTTA AAAGCACGTC AATGTACTAT GGTTATCATC
TCACATGACC GTCATTTCTT AAACTCAGTG TGTTCTCATA TGGCCGATAT TGATTATGGC
GAACTGCGTT TATATCCCGG CAACTATGAT GAATACATGA CGGCAGCAAC ACAGGTTCGT
GATCGTCTAT TGTCCGATAA TGCCAAGAAA AAAGCGCAGC TTTCTGAACT ACAGGATTTT
GTTAGCCGTT TTTCTGCCAA TGCATCAAAA GCCAAACAAG CGACCTCTCG TGCAAAACAG
ATGGATAAAA TCGTACTCGA TGAAGTTAAA CCATCAAGCC GTGTTAATCC TTATATTGTT
TTCAAACAAG AGAAAAAACT GTTTCGTACT GCACTGGAAG TCACTAAGGC CTGTAAATCT
TTTGATAAAG TCCTGTTTAA GGACTTTAAC CTGATGGTTG AAGTGGGTGA ACGTATTGCT
ATTATTGGCC AAAATGGTGT AGGTAAAACA ACATTATTAC GCACTTTAAT GGACCACACT
CAATTAGATT CAGGTCAGTT TAAGTGGTCT GAAAATGCGC ACTTAGGTTA TTACGCGCAG
GATCATGCTT ACGCTTTTGA AAAAGACCAA ACTTTAATGG AATGGATGAG TCAATGGATG
AAACCCGGCG ATGACGAACA ATCTATCCGC GGTACATTAG GGCGTTTACT GTTTGGCTCA
AACGACATCG GTAAATCCGT GAAAATCATT TCCGGTGGTG AGCAAGGCAG AATGTTATTT
GGTAAATTAA TGATGGACTT GCCCAATATA CTATTAATGG ATGAACCCAC CAATCACTTG
GATATGGAAT CTATTGAGTC GTTAAACTTA GCGCTTGATA ATTATAAAGG AACACTCTTA
TTTGTCAGTC ATGACCGTGA GTTTGTCTCT TCATTAGCAA CGCGTATTAT CGAAATCAAA
GCAGATAAAA TTATTGATTT CCACGGCACC TACAGTGAAT ACCTTAATAG CCAAGGTGTT
GTATCCGCTT AA
 
Protein sequence
MQFGAKPLFE NISVKFGNGN RYGLIGANGC GKSTFMKILT GDLEPSAGNV AKDPNERIAK 
LHQDQFAFEE FSVLDTVLMG HKEMWAVMAE RNRIYSLPEM SEEDGMKVAN LETEFAEMDG
YTADARAGEL LLSVGIPLDL HYGLMSEVAP GWKLRVLLAQ VLFSNPEIML LDEPTNNLDI
DTIRWLEDEL KARQCTMVII SHDRHFLNSV CSHMADIDYG ELRLYPGNYD EYMTAATQVR
DRLLSDNAKK KAQLSELQDF VSRFSANASK AKQATSRAKQ MDKIVLDEVK PSSRVNPYIV
FKQEKKLFRT ALEVTKACKS FDKVLFKDFN LMVEVGERIA IIGQNGVGKT TLLRTLMDHT
QLDSGQFKWS ENAHLGYYAQ DHAYAFEKDQ TLMEWMSQWM KPGDDEQSIR GTLGRLLFGS
NDIGKSVKII SGGEQGRMLF GKLMMDLPNI LLMDEPTNHL DMESIESLNL ALDNYKGTLL
FVSHDREFVS SLATRIIEIK ADKIIDFHGT YSEYLNSQGV VSA