Gene Ping_3255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3255 
Symbol 
ID4626325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4017827 
End bp4018249 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content45% 
IMG OID639798362 
Producthypothetical protein 
Protein accessionYP_944541 
Protein GI119946861 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCTT TTATGAAAAA AAATAAAGGT TTTACGCTCA TTGAATTATT GATTGTGATC 
GCAATTATCG GGATCTTGAC TGCTATTGTT GTACCCTCCT ACCAAGAGCA TATCCGCACC
GCTAACCGAA CTGCCGCACA ACTTGCCTTA ACTAAAATTG CACAAGAGTT TGAGCGAACC
AGTGCGCGTC AGGGAGGGTA CCCTACAGCC TTAACGGTTC CCACAGACAC TGCTGTGATC
GCAGCTGTTG ATAGCCCCGA TGTTTATACT ATTACTCCTT CGCCTGTTCC ATCAGAGCGT
AGTTCATCAA CATTTAAACT TTTCGCAACG CCTATCACTG GATTTGTAAA CGACGGTGAT
GAGTGTGGTG AGATGACTAT TGATCAGGCA GGTGCTACCA CGCCTGCGGA TTGTTGGAAT
TAA
 
Protein sequence
MVSFMKKNKG FTLIELLIVI AIIGILTAIV VPSYQEHIRT ANRTAAQLAL TKIAQEFERT 
SARQGGYPTA LTVPTDTAVI AAVDSPDVYT ITPSPVPSER SSSTFKLFAT PITGFVNDGD
ECGEMTIDQA GATTPADCWN