Gene Ping_3243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3243 
Symbol 
ID4626341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4001776 
End bp4003284 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content46% 
IMG OID639798350 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionYP_944529 
Protein GI119946849 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAACG ATCAGATAAA AACTGCCAGC AGTTTACCAC ATTCTTTATA TCGTGCTCAG 
CAGATCAAAG AATTTGAAGG CGCTGCTGCA GAATTAGCCG GAATGACCCT TTATGACCTG
ATGAAATCCG CTGGACAGGC TTGTTATCAG GTTTTTAAAG TGCGTTTTCC GAATGCCATA
AAAGTACTGG TTTTTACCGG TTGTGGTAAT AATGGCGGCG ATGGTTACAT TTTTGCCGGT
ATGGCTAAAA ATGCGGGACT CGATGTGCAG CTTTGCCAAA TCGGGGAGCC TACCCATTTG
TCTAATGAGG CGCAACGGGC CAAAAAAACA TGGCAACAAG GGCAAGGTAA AATAGAAAAT
ACTGCACAGG CAAATATTGC CGGTGCAGAT GTTATTGTTG ATGCCCTATT GGGGACGGGG
CTCTCGGGCA CAATGCGTCC TGAATTTAAA TCCTTAATTG ATAAAATCAA TCAGGCTGGT
AAACCCGTTT TGAGTGTTGA TATTCCATCG GGCCTTAATG CCGATAGCGG TGCAGTAAAC
GCGGTGGCGA TAAAAGCCGA TGCAACTATT ACCTTTGTGG GTTTAAAGCC GGGTTTATTG
ACCGGCGCTG CGGCGGAGCA TTGCGGACAA CTGTATTTTT CAGATTTAGG TATTAGCAAG
CAGTTTGGAG ATTTAGCGGT CAGTGACAGC ACACGAGTGT CCTATCAAGA TCTGACTCAT
TTATTAAAAA AACGTCGACG CAGCAGCCAT AAAGGCCAAT TTGGAAAAAC CTTAGTGATC
GGTGGTAATT TTGGTATGCC TGGTGCGGTA CGTTTAGCGG CAGAATCTGC ACTGCGCAGC
GGATCGGGAT TAGTTAAAGT ACTTACCCGG TTCGATAATC AAAGCGCTGT TATTGCCGGG
CGTCCGGAAC TGATGCTGCA AAATTTTTCT GAAAATACCG CTCAGCAGGA TCCGTTTGGT
GATTGGCCCA GTACACTGGT CATAGGACCT GGGCTGGGGT TTGATGATTG GGCACAGGGG
TTATTCGACA GGGTAATAAG CAGTGAGTTA AACTGCGTGG TGGACGCCGA TGCATTAACT
TTATTAGCTC GGAAAGCGGC TTATAAAGAT AATTGGATTT TAACACCCCA CCCCGGTGAA
GCGGCTAAAT TATTAGGCGT ATCTATTGCT GAAATTGAAA TGGATCGCTT TAGTGCCGTG
CGCCGGTTAC AAGCCATTTA TGGTGGAATT GTGATTTTAA AGGGAGCTGG AACCTTAATT
TGTGATGGAA ATAAAATATT TGTCGCAAAT GTCGGCAATC CTGGTATGGC AAGTGGTGGC
ATGGGTGATG TGCTTTCTGG TATTATAGGC GGCCTGTTAG CGCAAGGTTT AAATTCGCTT
GATGCTGCAA GGCTTGCGGT CTGTATCCAC GGGGATGCAG CTGACCTTGC TGCGCGACAA
GGTGAACGTG GATTATTAGC CAGTGATCTG TTCTCTTATA TTAGGAAATT AGTTAATCCA
TCATGTTAA
 
Protein sequence
MLNDQIKTAS SLPHSLYRAQ QIKEFEGAAA ELAGMTLYDL MKSAGQACYQ VFKVRFPNAI 
KVLVFTGCGN NGGDGYIFAG MAKNAGLDVQ LCQIGEPTHL SNEAQRAKKT WQQGQGKIEN
TAQANIAGAD VIVDALLGTG LSGTMRPEFK SLIDKINQAG KPVLSVDIPS GLNADSGAVN
AVAIKADATI TFVGLKPGLL TGAAAEHCGQ LYFSDLGISK QFGDLAVSDS TRVSYQDLTH
LLKKRRRSSH KGQFGKTLVI GGNFGMPGAV RLAAESALRS GSGLVKVLTR FDNQSAVIAG
RPELMLQNFS ENTAQQDPFG DWPSTLVIGP GLGFDDWAQG LFDRVISSEL NCVVDADALT
LLARKAAYKD NWILTPHPGE AAKLLGVSIA EIEMDRFSAV RRLQAIYGGI VILKGAGTLI
CDGNKIFVAN VGNPGMASGG MGDVLSGIIG GLLAQGLNSL DAARLAVCIH GDAADLAARQ
GERGLLASDL FSYIRKLVNP SC