Gene Ping_3240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3240 
Symbol 
ID4626338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3996896 
End bp3998782 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content43% 
IMG OID639798347 
ProductDNA mismatch repair protein MutL 
Protein accessionYP_944526 
Protein GI119946846 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATTC AAATTTTAGC TGCTCGCCTG GCTAACCAAA TTGCTGCGGG TGAGGTCGTT 
GAACGCCCGG CTTCGGTGGT TAAAGAGCTG ATTGAAAACA GCTTAGATGC CGGGGCGACA
AAAATTGAGA TCGATATTGA AAAGGGCGGC GCAAAATGTA TCCGTGTCAA AGACAATGGT
GCAGGCGTTT GTCAAGAACA GCTGACCCTG GCATTAAGCC GTCATGCAAC CAGTAAAATA
AGCCATTTAG ACGATCTCGA AGCGATTGTC AGCTTGGGTT TTCGCGGAGA AGCCTTAGCC
AGTGTCAGCT CTGTCTCGCG TCTGACATTT ACTTCTAAAC CCGCCGATCA GGAGCAGGCC
TGGCAAGCGA TCGCTGAAGG CCGGGATATG CAGGTGACTA TTCAACCTGC CGCACATCCC
CAGGGAACAA CGGTGGAGGT TTTGGATCTG TTTTTTAATA CCCCCGCCAG GCGGCGGTTT
TTAAAAACAG AAAAAACGGA ATTTCAGCAT ATTGACGAGT TGATTCGGCG CATCGCATTA
AGCCGTTTTG AAATTACTTT TGTACTGAAA CATAATCATA AAATTGTTCA TCAGTATCGC
GCCACACAAA CACAAAGTCA GCAGGAAAAA CGTCTTGCTT CTATCTGCAG TGAAAGTTTT
GTCAGCAGCG CCTTATATTT TCAAAATAGC GATAATGCGT TAAAAATATC CGGTTGGGTT
TCAGATAAGC TCTCCGCACG GTCATCAAAC GATGTGCAGT ACTGCTATAT TAATGGCAGA
GTGATCCGCG ATAAATTAAT TAACCATGCG ATCAAGCAGG TTTATGCTTA CTCCTTACCT
CAGGGGAAAT TCCCCGCTTA TGTTATCTAT ATTGAATGTG ATCCGGATCA AGTGGATGTA
AATGTGCACC CCTCAAAACA TGAGGTACGT TTTCATCAGG CGCGTTGGGT ACATGATTTT
ATCGTCAGCA CCTTAACGGT GACACTAAAT GAATCCCCCT TGTCGGCATC AGAACCACAA
TCACAACCAA AACCAAGTGA ACACGCTTAT TTACCCGCCA ACCGCGGGGA GGAAAAAACT
GATTCTCAGT ATGAGCCAAA AGAAAAAAAT AAAAGTGCCG GGCGGGTTAA TGAGCAAACA
GCAGCGCCAT CTTCAGGTTA TGCTAAGCGC GAAACAAACC CACAACTGGA TCAGGCTAAA
ATGGCGGCCT ATTGCGATTT TGTCGCGGAA GCTCACTTAC CTTTCTCGGC AGACGAACAA
CAATCATCTA CTTTATCTGA TCTGACTTTT GCGACTGTCG TGTGTTTGAT CGACAGGCAA
TATTTATTAA TTAAGCTCAA TGCAAAGCAG CAGCTGCTCA ATATTGACTC GCCTTTTTTA
GTGTTGTCCT TGGAAAACGT TGATTTAATG ATTAAGCAAA TGGAATTATT TGCTGCCTGG
TCCGATGGAG AAGTAATAGC ACAACCTTTG TTATTACCCG TGCGTGTGGA GCTTGATGCG
CTTTTATTGA AAACTAGCGA AGACTTTAAT GAGTTATTTA TGCGCTTAGG TTTTGTTTTT
AAAATACAGG GCAGCAAGCT GATTATTAGT AAAGTGCCCG CGCTACTCAG GCAGGCACCG
GTTGCGAAAA TTATACCTGA GTTATTAACC TTTTTAAGTC AAACAGATAA CAATATGGAT
GCACAACAGG TTAATCTCTT TTGTGTCTTT TTAGTCAACA CATTAAAACA GCAGCAAGCA
GAAAATATTA ACTGGACTGA GCAAAGTGCC AAAGCGCTTT TTGACTTATT ACTTTCGTTG
TTCTCGGAAA AGCTTAGTGA CTGGCAGAAA CAATTATTTA GAGTGCCCGA TTTATCATTA
TTAGTACAAG GTTTTTCACA TGAATAA
 
Protein sequence
MPIQILAARL ANQIAAGEVV ERPASVVKEL IENSLDAGAT KIEIDIEKGG AKCIRVKDNG 
AGVCQEQLTL ALSRHATSKI SHLDDLEAIV SLGFRGEALA SVSSVSRLTF TSKPADQEQA
WQAIAEGRDM QVTIQPAAHP QGTTVEVLDL FFNTPARRRF LKTEKTEFQH IDELIRRIAL
SRFEITFVLK HNHKIVHQYR ATQTQSQQEK RLASICSESF VSSALYFQNS DNALKISGWV
SDKLSARSSN DVQYCYINGR VIRDKLINHA IKQVYAYSLP QGKFPAYVIY IECDPDQVDV
NVHPSKHEVR FHQARWVHDF IVSTLTVTLN ESPLSASEPQ SQPKPSEHAY LPANRGEEKT
DSQYEPKEKN KSAGRVNEQT AAPSSGYAKR ETNPQLDQAK MAAYCDFVAE AHLPFSADEQ
QSSTLSDLTF ATVVCLIDRQ YLLIKLNAKQ QLLNIDSPFL VLSLENVDLM IKQMELFAAW
SDGEVIAQPL LLPVRVELDA LLLKTSEDFN ELFMRLGFVF KIQGSKLIIS KVPALLRQAP
VAKIIPELLT FLSQTDNNMD AQQVNLFCVF LVNTLKQQQA ENINWTEQSA KALFDLLLSL
FSEKLSDWQK QLFRVPDLSL LVQGFSHE