Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3236 |
Symbol | |
ID | 4626365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3992620 |
End bp | 3993792 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639798343 |
Product | HflK protein |
Protein accession | YP_944522 |
Protein GI | 119946842 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0144208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTGGA ACGAACCGGG AAAAGATAAA GACCCGTGGA AAAACAATGA TAAAAAGAAA GATCAGGGAC CGCCTGATCT TGATGTCGTT TTCCAGAAAT TATCAAAATT ACTCGGTGGT TTGTTTGGTA AAAAGCCTTC TTCAGACGAC AGCGGCAATA AGGGTGGCGG TAATATTGCC ATTATTGCCG TGTTTGCAAT AATTGCTATT GTTTGGTTTG TCAGTGGTTG GTATACGATT AAAGAATCTG ATCGTGGTGT CGTATTACGT TTTGGTGCTT ACCATTCTCA AGTTGAAGCG GGTTTGCATT GGAATCCGAA GTTTATTGAT CAAATTATTC CGATTAACGT TGAAGCATTT CGTACTATGC CAACAACGGG GTTCATGCTG ACGGAAGATG AAAATATTGT TAAGGTTGGC ATGGAAGTGC AGTACCGTAT TATTGCACCT GAAAAATACC TGTTTAGTGT CACTAATGCG GATAACAGTT TATTACAAGC ATTAGATAGT TCATTGCGTT TTGTTGTTGG TCATTCGACT ATGGATGATG TGTTAACAAC AGGCCGTGAA GTGGTGCGCC AGGAAACATG GGTAATGATC GACGATATTA TCGAATCATA CGATTTAGGT ATCGATGTTG TGGATGTTAA CTTACAACAA ACACGTCCGC CTGAAGAAGT TAAAGATGCC TTTGATGATG CTATTGCCGC GCAGGAAGAT GAACAGCGTT TTATACGTGA AGCTGAAGCT TATGAACGTG AAAAAGCACC GATCGCTCGT GGTCAAGTAA AACGTATTGA ACAGCAGGCC CTAGCTTATA AAGAAGGTCT TATTTTAAAA GCGCAGGGTG AAGTTGCCCG TTTTAATCAA TTATTACCTC AATATCAAGC CAACCCTGAA GTGACTCGTC AACGTCTCTA TCTGGAAACC ATGGAAAAGG TATTGGATAG CACCTCTAAA GTGCTTATTG ATAATAATGC TGGTGGTAAT TTAACTTTTC TTCCATTGGA TAAATTGATG GGCGGAAGCA CAGATAAAGT AGGGCTGGAT AAAAGTGTTT CAGAAATTGA AACACGTTCA CGTGCCGATG AAAAAGCAGA CCAAGATGAA CGAGCGGGCG GAACTACTTC GCCGAGTCGT AGTAGTAACA GAAGCTCTGG GAGAGACTAC TAA
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Protein sequence | MAWNEPGKDK DPWKNNDKKK DQGPPDLDVV FQKLSKLLGG LFGKKPSSDD SGNKGGGNIA IIAVFAIIAI VWFVSGWYTI KESDRGVVLR FGAYHSQVEA GLHWNPKFID QIIPINVEAF RTMPTTGFML TEDENIVKVG MEVQYRIIAP EKYLFSVTNA DNSLLQALDS SLRFVVGHST MDDVLTTGRE VVRQETWVMI DDIIESYDLG IDVVDVNLQQ TRPPEEVKDA FDDAIAAQED EQRFIREAEA YEREKAPIAR GQVKRIEQQA LAYKEGLILK AQGEVARFNQ LLPQYQANPE VTRQRLYLET MEKVLDSTSK VLIDNNAGGN LTFLPLDKLM GGSTDKVGLD KSVSEIETRS RADEKADQDE RAGGTTSPSR SSNRSSGRDY
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