Gene Ping_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3234 
Symbol 
ID4626363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3990279 
End bp3991592 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content43% 
IMG OID639798341 
Productadenylosuccinate synthase 
Protein accessionYP_944520 
Protein GI119946840 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000199193 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAATA ATGTAGTAGT ACTTGGCACT CAATGGGGTG ACGAAGGTAA AGGCAAGGTC 
GTAGACCTGC TAACTGACAA AGCACAATGG GTTGTTCGCT ATCAAGGTGG ACACAATGCT
GGTCACACAC TTGTAATTGA TGGTGAGAAA ACAGTTCTTC ATCTTATCCC ATCGGGAATC
CTGCGCGATA ACGTAAAATG TGTTATCGGA AACGGCGTGG TGTTATCACC TGAAGCTCTA
TTAGAAGAGC TGAAAATGCT GGAAGATCGG GGTGTGCCTG CAAAAGAACG TCTGCATATT
AGTGAAGGCT GTCCTTTAAT TCTCCCGTAT CATATTGCTC TTGATGCTGC ACGAGAACTT
GCTCGTGGTG ATAAAGCCAT TGGTACAACA GGCCGTGGTA TTGGTCCTGC ATATGAAGAT
AAAGTTGCTC GTCGCGGATT GCGCGTTGAT GATTTATTTA ATATGGAAAC TTTTGCAGTT
AAGCTAAAGG AAGTAATTGA TTACCATAAT TTCCAATTAG TGAATTACTA CAAAGTAGAA
GCGGTTAACT TTGATGAAGT ATTAAAACAG GTGCAAAGTG TTGCAGACCT GCTTATTAGT
CTGGTTATCG ATGTAACGGA CGAACTTGAT AAAGCTCGTT TACGTGGTGA AAATATTCTG
TTTGAAGGTG CTCAGGGCAC GCTGCTTGAT ATTGACCACG GTACCTACCC GTATGTAACC
TCTTCAAATA CAACCGCTGG TGGTGTTGCG ACGGGAAGTG GTTTTGGTCC TGCTCATATC
GATTATGTAT TAGGTATTGT CAAAGCTTAT ACGACGCGTG TCGGATCGGG CCCTTTCCCA
ACTGAATTGT ATGATGGTGT CGATAAACTT GATCCGGCTG GTAAACATCT TGGTACTGTC
GGGCATGAGT TTGGCGCGAC AACAGGTCGT TTACGTCGGA CAGGCTGGTT TGATGCAGTT
GCCATTAAAC GTGCGGTGCA ATTAAACAGT ATTACCGGTT TTTGCTTAAC TAAACTTGAT
GTTTTAGATG GTTTGGAAGA AATTAAAATC TGTACTGCCT ACAAAATGCC CGGTGATAAA
CTGGTAGACG TTCCACCTAT GTCTGCAGAG GGTTATGAGC AAGCGGTACC TGTTTATGAA
ACAGTGCCTG GCTGGACGGA AAGTTCATTT GGGGTAACCT CATTTGATGC GCTGCCAAAA
AATGCTCAAG CTTATGTTCG ACGTTTGGAA GAGATAACAG GTATCCCAAT GGATATTATC
TCGACAGGCC CGGATCGTAA TGAAACTATG ATTCAGGTTA ACCCGTTTAA TTAA
 
Protein sequence
MGNNVVVLGT QWGDEGKGKV VDLLTDKAQW VVRYQGGHNA GHTLVIDGEK TVLHLIPSGI 
LRDNVKCVIG NGVVLSPEAL LEELKMLEDR GVPAKERLHI SEGCPLILPY HIALDAAREL
ARGDKAIGTT GRGIGPAYED KVARRGLRVD DLFNMETFAV KLKEVIDYHN FQLVNYYKVE
AVNFDEVLKQ VQSVADLLIS LVIDVTDELD KARLRGENIL FEGAQGTLLD IDHGTYPYVT
SSNTTAGGVA TGSGFGPAHI DYVLGIVKAY TTRVGSGPFP TELYDGVDKL DPAGKHLGTV
GHEFGATTGR LRRTGWFDAV AIKRAVQLNS ITGFCLTKLD VLDGLEEIKI CTAYKMPGDK
LVDVPPMSAE GYEQAVPVYE TVPGWTESSF GVTSFDALPK NAQAYVRRLE EITGIPMDII
STGPDRNETM IQVNPFN