Gene Ping_3229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3229 
Symbol 
ID4624662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3983831 
End bp3984574 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content38% 
IMG OID639798336 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_944515 
Protein GI119946835 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCAA AAAATCAGCT AAAACTTATT CATGCACTTG AGCAAAAAAA ACAGCGTAAA 
AAAAATGGTC TGTTTTTAGT GCAGGGTGAA AAAAATGTGG GTGAATTGTT TAATTCTGAT
TTTACGGTAA AACAACTTTT TGCAACCAGC AGTTATATCA ATAAAAATAG CAGGGCACTT
AACGAGTTTG GCCTTGTTAG TCTTACTATT GAAGCCACAG AAGATGAGTT AAAAAAAGCA
GGGACTTTAA TATCAAATAA CAGCGTGCTT GCTGTGGTCG AGTGCAAAAT AATGCCGCTT
CCACAAATCC AAAAAGATGA ATTGATTCTG GTATTGGATC AGGTAGGTGA TCCCGGAAAC
TTAGGGACTA TTATTCGTGT TGCCGACTGG TACGGGATTA AACATATTAT TTGCAGCCCG
GACTGTGCTG ATTTTTATAA TCCTAAAGTG ATCGCTGCCA GTATGGGATC ATTTGCACGA
GTACAGGTGA GTCACACAGA TTTGTCTGAA TATCTGAGTC AACAATCAAT GGCGATTTAT
GGGGCTTTTC TGGAAGGGGA AAATATTCAT AAAGCAAATT TAAATAAAAG TGCTTTTATT
GTGATGGGCA GTGAATCACA CGGTATTTCG CCAGAGATTG AAAAATTTAT CAGCCATAAA
ATGACGATCC CCAGTTTTGG AGGTGCGGAG TCATTAAATG TGGCTATGGC AACGGGTATT
ATTGTCGATA ATTTTAAACG TTAA
 
Protein sequence
MISKNQLKLI HALEQKKQRK KNGLFLVQGE KNVGELFNSD FTVKQLFATS SYINKNSRAL 
NEFGLVSLTI EATEDELKKA GTLISNNSVL AVVECKIMPL PQIQKDELIL VLDQVGDPGN
LGTIIRVADW YGIKHIICSP DCADFYNPKV IAASMGSFAR VQVSHTDLSE YLSQQSMAIY
GAFLEGENIH KANLNKSAFI VMGSESHGIS PEIEKFISHK MTIPSFGGAE SLNVAMATGI
IVDNFKR