Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3225 |
Symbol | |
ID | 4624658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3980220 |
End bp | 3981551 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639798332 |
Product | peptidase M23B |
Protein accession | YP_944511 |
Protein GI | 119946831 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.755339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.375504 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTATTTT TGTTACCTTT AAAGGCGTTT TTTAAAGCGT CTATCGCCGT TGTGAATAAT CTTCCCCGGA AACATTTTTT CGCTTTGATT TTATTATTTG TATTTCTTTT GGTTATTTCC CTGGTTCCCA TGCAGCCGAA AACCAAAAAA ACAATTTACC GCTCATTAGA ACTACCTGAG GGAGTTGTTG TTAAAGATGA GCATGCGGCT GCCGAACCGC TTGCTGCAAT AAAAGATGAA TATGCAAAAG TATTTCCTGA TTTTTCGGGA AACAAAGAAG TTGAATTTGA GGTTAACGAT GGTGACTCTC TCAGCAATAT TTTTGAAAAA GAGAGCTTGT CGGCAGGTGC ATTACAGCTT TTGTTAGATG CCGATAAAGA ACATCTGCGC TTAGCCAACC TAATCCCAGG GCAAAGGATT AAGTTATTGA TTGGTCCTGA CAACAATCTG CTCTCCTTAA AAGTATTTTT GGATCTTGCC AATACGTTAA CCTTTACTCT GAAAGAGGAT CAATATGATG CACTTTTGGA AACTAAAGCG GGGAAATGGC GCGAAAGTTT ATACCAAGGT CGTATCATAG GAAGCTTCTA TAAGACAGCC AAAGCTTCAG GTCTTACGGC GGCGCAGATT CAACAAGTAT CAGCGACTCT GCAGGATAAA ATTAACTTTA ACCGTCTTTA TGCTGGAGAT ACTTTCCGTG TGTTAGTGTC AAAACAATAT ATTGATGGAC AATATAGTTC AGAAAGTGAC GTATTGGCTA TTTTGATTAA AAACAGGAAT AAAACTTATA CCGCTTTTCT GCATGAAGAC GGGCGTTATT ATGATAAAAA TAGGCAAGGC TTAAGTAAAG CTTATCGACG CTTTCCTGTG AATGGAAAGT TCCGCATCAG TTCTAACTTT AATCGAAAAC GTTTACATCC AATCACCAAA AGAGTAAGTC CCCATAACGG TACTGATTTT GCTGTATCAA CGGGCACAAA AGTTTATAGC ATTGGTGATG GTGTTGTTTT GCGGGCAGGT TATCATCCCG CAGCTGGCAA TTATATTGTT ATGCAGCATA GCCGGAAATA CACCACACGT TATTTGCATT TAAGTAAAAT TTTGGTTCGT AAAGGGCAGA GAGTAGAAAG GGGCGCTGTG ATAGCTAGAA GTGGTAATAC CGGGCGTTCA ACCGGGGCGC ATCTGCATTA TGAATTTCAA ATAAATAATC GCCCGGTAGA TGCAATGAAA GTGTCGTTAC CTCTTTCAAC AGCAGTCTCT AAAAAAGAGG AGCGTGCTTT TGATAAAAGA CGCGATCTTT ACCTGCAGGA GATGGGCATT AATAATATCT AA
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Protein sequence | MLFLLPLKAF FKASIAVVNN LPRKHFFALI LLFVFLLVIS LVPMQPKTKK TIYRSLELPE GVVVKDEHAA AEPLAAIKDE YAKVFPDFSG NKEVEFEVND GDSLSNIFEK ESLSAGALQL LLDADKEHLR LANLIPGQRI KLLIGPDNNL LSLKVFLDLA NTLTFTLKED QYDALLETKA GKWRESLYQG RIIGSFYKTA KASGLTAAQI QQVSATLQDK INFNRLYAGD TFRVLVSKQY IDGQYSSESD VLAILIKNRN KTYTAFLHED GRYYDKNRQG LSKAYRRFPV NGKFRISSNF NRKRLHPITK RVSPHNGTDF AVSTGTKVYS IGDGVVLRAG YHPAAGNYIV MQHSRKYTTR YLHLSKILVR KGQRVERGAV IARSGNTGRS TGAHLHYEFQ INNRPVDAMK VSLPLSTAVS KKEERAFDKR RDLYLQEMGI NNI
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