Gene Ping_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3223 
Symbol 
ID4624656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3978621 
End bp3979442 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content40% 
IMG OID639798330 
Productnucleotide phosphate derivative pyrophosphohydrolases, MutT/nudix family protein 
Protein accessionYP_944509 
Protein GI119946829 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.220082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGG AAAAAAATAA CGTTAGCAAG CAAGAGAATG CTTGGTGGTT TATTATCGCG 
AGAGATCAAA TTGTATTACA GCCGCAAGGG AATTTCATTC CCTACGGTAA TCTTGATGAT
TTGCCATTTC CCGAAGCATT AGCTAATAAT GTGAAAAAAA TAGGAGATTA CGATTCAAGC
CCTTGTTATT TAATCGTATT GCAGGAGAAA TTAGATGTTG GTCTGGGGGA ATATTTCCCA
TTACGCTCTT TGTTGGGACA GATCCATGAT CTCTTATTTG ATCTGGCGGG TCGTGCCTTT
CAAGTCGCTT TATTTTATCA AACACATCAG TATTGTGGTA AGTGCGGTAA TAAAATGCAT
GCCATAAACT GGGAAACCGC AATGAAATGC TACCATTGCC AGCACCGCTG TTATCCGCGT
GTTTCTCCCT GTGTTATTGT TGGTATTCGT AAAGGCAAGG AAATATTATT AGCAGTGCAT
CATCGCCATT TGAAACAGAA CAACCCGGTT TTTACGGTTT TAGCCGGATT TGTTGAAGCC
GGAGAAACAC TGGAGATGTG TGTTGAACGT GAAGTCTATG AGGAATCAAG GATCCGGGTC
AAAAATATCG AATATATCAG TAGTCAACCT TGGCCTTTCC CGCACTCTTT AATGATGGGT
TTTTTTGCTG AATATGAATC AGGTGAAATC AAGATTGATA AAAATGAGCT TGTTGAAGCA
GCTTGGTATC ATATTGATAA TCTGCCTGTG TTACCAAATA ACGGCACCAT TGCTCGAAAG
TTGATTAACA AAATGGTTGA ACAATGCAAA GTCGCAATAT GA
 
Protein sequence
MQPEKNNVSK QENAWWFIIA RDQIVLQPQG NFIPYGNLDD LPFPEALANN VKKIGDYDSS 
PCYLIVLQEK LDVGLGEYFP LRSLLGQIHD LLFDLAGRAF QVALFYQTHQ YCGKCGNKMH
AINWETAMKC YHCQHRCYPR VSPCVIVGIR KGKEILLAVH HRHLKQNNPV FTVLAGFVEA
GETLEMCVER EVYEESRIRV KNIEYISSQP WPFPHSLMMG FFAEYESGEI KIDKNELVEA
AWYHIDNLPV LPNNGTIARK LINKMVEQCK VAI