Gene Ping_3207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3207 
Symbol 
ID4624816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3962694 
End bp3963698 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content45% 
IMG OID639798314 
Productglycerol-3-phosphate dehydrogenase (NAD(P)(+)) 
Protein accessionYP_944493 
Protein GI119946813 
COG category[C] Energy production and conversion 
COG ID[COG0240] Glycerol-3-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0769947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA ATATAGCCAT TACAGTCTTA GGGGCGGGAT CATATGGCTC CGCCCTTGCT 
GTATCTTTGG CAAGAAACGG TCATCCCACC TTGCTTTGGG GACATCAAGA AGATCATATC
AAACGGTTAC AAGCTGATCG CGAAAACAAA AAGTTTTTGC CAAATATTAA ATTTCCGGAA
CTATTAACAC CGGAAGTTAA TTTAAAGGTT TGTTTAGCTG CCACTCGCAA TATTCTGTTG
GTAGTCCCAA GCCATGTTTT TGCACTTGTT TTACAACAAA TAAAACCATT TCTTACCCCG
CAGCACCGCA TTGCCTGGGC GACAAAAGGG TTAGAAGCCA AAACAGGGCG TTTATTGCAG
GAAGTGGCTA CGGACATCTT AGGGCAACAT TACCCTTTAG CGGTCATTTC CGGTCCAACT
TTTGCGATGG AAGTTGCGAA AGGATTACCG ACCGCAGTGG CTGTCGCTGG ATCTGAAAGC
AAGTTTACTC AGGATATTGC CGCTCTCTTT CATAATAACC GTAATTTCAG AACCTATATT
TCAGATGATT TCACTGCTGT ACAACTAGGT GGTGCAGTGA AAAATGTGAT TGCAATAGGG
GCTGGCCTCG CCGATGGTTT AGGTTTTGGT GCAAATGCCC GTACCGCATT GATTACACGC
GGCTTGGCTG AATTAACGCG TTTGGGTGTG GCGTTAGGCG CTAAAGAATC CTCTTTTATG
GGCATGGCAG GTCTGGGTGA TCTGGTATTA ACTTGTACCG ATAATCAATC TCGCAATCGC
CGTTTTGGAC TTGCTTTGGG GCAGGGTAAA GGGATTAACG CAGCGCAAAT TGAAATAGGT
CAAGTGGTAG AAGGTTATCG AAATACCGAA GAGGTGTATA ACTTGTCGCA TCGGATTGGC
ATTGAAATGC CCATTTGTGA ACAAATTTAT TATGTCTTAT ATCAGGATAA AGCCGTCAAA
CAAGCCGCGA TGGACTTGTT ATCCCGTAGC CCAAAGGACG AGTGA
 
Protein sequence
MADNIAITVL GAGSYGSALA VSLARNGHPT LLWGHQEDHI KRLQADRENK KFLPNIKFPE 
LLTPEVNLKV CLAATRNILL VVPSHVFALV LQQIKPFLTP QHRIAWATKG LEAKTGRLLQ
EVATDILGQH YPLAVISGPT FAMEVAKGLP TAVAVAGSES KFTQDIAALF HNNRNFRTYI
SDDFTAVQLG GAVKNVIAIG AGLADGLGFG ANARTALITR GLAELTRLGV ALGAKESSFM
GMAGLGDLVL TCTDNQSRNR RFGLALGQGK GINAAQIEIG QVVEGYRNTE EVYNLSHRIG
IEMPICEQIY YVLYQDKAVK QAAMDLLSRS PKDE