Gene Ping_3206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3206 
Symbol 
ID4624815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3961490 
End bp3962602 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content43% 
IMG OID639798313 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_944492 
Protein GI119946812 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.134417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TAGGCTTAGT TGGTTGGCGC GGTATGGTGG GCTCTGTGCT TATGCAAAGA 
ATGCGCGATG AAAATGATTT TGCAACAATT GAACCTGTAT TTTTTACCAC CTCGCAAATT
GGCCTTTTGG CACCTGAAAT TGGTAAACCA AGTGATACAT TAAAAGATGC ATTTGCCATT
GACGAACTGG CTAAGATGGA CATCGTGGTC ACTTGCCAAG GTGGTGATTA TACTAATGAA
GTCTACCCAA AACTGCGCGC TGCGGGCTGG AAGGGTTACT GGATTGATGC CGCGTCTTCA
TTACGTATGC AGGATGACAG TATTATCGCA TTAGATCCTG TCAACAAAGA TGTTATACAA
CAAGGCATTA AAGACGGAGT GAAAACTTTC GTTGGCGGTA ACTGTACTGT TTCATTATTA
TTAATGGCAT TGGGCGGTTT ATTCGAAGAA GAACTCATCG AGTGGGTAAC CCCGCATACT
TATCAGGCAG CTTCGGGCGC CGGTGCACGA AATATGCGCG AACTAATTAG TCAGATGGGC
TCTATTAGTG CGTCTGTTGC CGATAAATTA GCCGATCCTG CCTCTGCGAT TTTAGAAATA
GATCAGCAGG TAGCTGAACA TATTCGTAGT GATGCGCTGC CAAAAGAGCA GTTTGGAGCC
CCCTTGGCAG GTAGTTTAAT TCCCTGGATT GATGTTCCTA TGCCATCTGG TCAAAGTAAA
GAAGAGTGGA AAGCACAGGT TGAAGCAAAT AAAATTTTAG GAACAAGTGA CAAGCAGGTG
CCAATTGATG GTTTATGTGT CCGTATTGGT GCAATGCGCT GCCATAGTCA GGCAATCACT
ATGAAACTAA AAAAAGATAT TTCAGTTGCT GAAATTGAAC GCATTTTAGG TGCCCATAAT
GAGTGGGTTA AAGTGATTCC AAATGAACGT GATATCACAA TAGAAGAACT TTCTCCTGCT
AAAGTAACGG GTACTTTAAC GATTCCTGTT GGCCGAATTC GAAAATTAGC AATGGGACCA
GAATACGTTA CTGCATTTAC GGTTGGTGAC CAATTATTAT GGGGCGCGGC TGAACCACTT
CGTCGTATGC TGAACATTCT ACAAGCGTCA TAA
 
Protein sequence
MKKVGLVGWR GMVGSVLMQR MRDENDFATI EPVFFTTSQI GLLAPEIGKP SDTLKDAFAI 
DELAKMDIVV TCQGGDYTNE VYPKLRAAGW KGYWIDAASS LRMQDDSIIA LDPVNKDVIQ
QGIKDGVKTF VGGNCTVSLL LMALGGLFEE ELIEWVTPHT YQAASGAGAR NMRELISQMG
SISASVADKL ADPASAILEI DQQVAEHIRS DALPKEQFGA PLAGSLIPWI DVPMPSGQSK
EEWKAQVEAN KILGTSDKQV PIDGLCVRIG AMRCHSQAIT MKLKKDISVA EIERILGAHN
EWVKVIPNER DITIEELSPA KVTGTLTIPV GRIRKLAMGP EYVTAFTVGD QLLWGAAEPL
RRMLNILQAS