Gene Ping_3205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3205 
SymbolnadE 
ID4624814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3960442 
End bp3961272 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content39% 
IMG OID639798312 
ProductNAD synthetase 
Protein accessionYP_944491 
Protein GI119946811 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0171] NAD synthase 
TIGRFAM ID[TIGR00552] NAD+ synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.197549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC AAATATTGCA AGAGATGCGT GTTTTAGTCA CTATCAATGA AGAAATAGAA 
ATTAAACGTC GAATCAACTT TATCAAAAAA AAATTACAGC AAGCTGAATG TTATACTCTG
GTTTTGGGTA TCAGTGGCGG TGTTGACTCA AGTACCGCCG GTCGTTTATG TCAACTCGCA
GTTGAACAAT TAAATCAATC GACAGATACG GACAAATATC AATTTATTGC CGTTCGACTT
CCCTATGCGA TTCAGAAAGA TGAAGATGAG GCACAATTAG CATTACAATT TATACGACCT
TCACATGTTA TTACCATTAA TATAAAAAAT GGCGCTGATG GCATACATGA AAGCACCTTA
GCGGCACTTC AGACAAGTAG CGTCAATCTT TCTGCCGATA CCAATATTGA CTTTATTAAG
GGTAATGTTA AAGCGCGAAT GCGAATGATC GCACAATATG AAATTGCAGG GTTAACCGGA
GGGTTAGTTG TCGGAACAGA TCACAGTGCA GAAAATATTA CCGGCTTTTA TACCAAACAT
GGCGATGGGG CTTGTGATTT AGCACCCTTA TTCGGTTTAA ATAAACGTCA GATTCGCGCA
TTAGCTAAAC AGCTTGGCGC ACCTGCAATA TTAATTGAAA AAGCACCCAC AGCTGACTTG
GAAGAAGATA AACCTCAGCT GCAGGATGAA CATGCATTAG GGATTACTTA TGATCAAATT
GATGATTTCT TAGAAGGTAA AGCTGTCACA CAGGAAATTG AAGATAAGTT AATCGCAATT
TATCTGCGTA CCCAACACAA GCGTCAAGCT GTTCCAACCA TTTATGATTG A
 
Protein sequence
MKQQILQEMR VLVTINEEIE IKRRINFIKK KLQQAECYTL VLGISGGVDS STAGRLCQLA 
VEQLNQSTDT DKYQFIAVRL PYAIQKDEDE AQLALQFIRP SHVITINIKN GADGIHESTL
AALQTSSVNL SADTNIDFIK GNVKARMRMI AQYEIAGLTG GLVVGTDHSA ENITGFYTKH
GDGACDLAPL FGLNKRQIRA LAKQLGAPAI LIEKAPTADL EEDKPQLQDE HALGITYDQI
DDFLEGKAVT QEIEDKLIAI YLRTQHKRQA VPTIYD