| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3202 |
|---|
| Symbol | |
|---|
| ID | 4624811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 3955845 |
|---|
| End bp | 3956426 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639798309 |
|---|
| Product | putative DNA uptake protein |
|---|
| Protein accession | YP_944488 |
|---|
| Protein GI | 119946808 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown |
|---|
| COG ID | [COG0316] Uncharacterized conserved protein
[COG0694] Thioredoxin-like proteins and domains |
|---|
| TIGRFAM ID | [TIGR03341] IscR-regulated protein YhgI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0161749 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAA TCACTCCAAT TGCACAAGCA CATTTTAAAA AATTACTTGA ACCACAAAAA
GAAGGAACAC ACATTCGCGT GTTTGTTATT AATCCCGGCA CAGCTAAAGC TGAATGCGGT
GTTTCATATT GCCCACCTGA AGCTGTCGAA AGCAGTGATA CACGGTTAAC TTTTGATGGG
TTTGATGCAT TGATTGATGA GGTTAGTGTA CCCTTTTTAG AAGATGCCTT TGTAGATTTA
GTGGAAGAGG ATGCGGGAAC TCAGCTGACC CTTAAGGCAC CCAATGCAAA AATGCGTAAA
GTAAAAGACG ATGCGCCACT ACTTGAACGT GTTGAATATG TTATCCAGGT TCAAATAAAT
CCACAACTGG CAAGCCACGG TGGTTTTATC AAATTAATAG AAATAACAGA GGATAATGTT
GCTATTATTG AATTTGGTGG TGGTTGTAAC GGTTGCTCTC AAGTTGATTT GACACTCAAA
CAAGGTGTTG AAAAAGAGCT GATAGACGAA TTTTCTGGCG AGCTAAATGC TGTGAGAGAT
ATCACCGAAC ATGAAAGTGG CGATCACTCT TTTTATAAAT AA
|
|---|
| Protein sequence | MIEITPIAQA HFKKLLEPQK EGTHIRVFVI NPGTAKAECG VSYCPPEAVE SSDTRLTFDG
FDALIDEVSV PFLEDAFVDL VEEDAGTQLT LKAPNAKMRK VKDDAPLLER VEYVIQVQIN
PQLASHGGFI KLIEITEDNV AIIEFGGGCN GCSQVDLTLK QGVEKELIDE FSGELNAVRD
ITEHESGDHS FYK
|
|---|
| |