Gene Ping_3198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3198 
Symbol 
ID4624807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3953003 
End bp3953221 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content39% 
IMG OID639798305 
Producthypothetical protein 
Protein accessionYP_944484 
Protein GI119946804 
COG category[R] General function prediction only 
COG ID[COG3529] Predicted nucleic-acid-binding protein containing a Zn-ribbon domain 
TIGRFAM ID[TIGR02443] conserved hypothetical metal-binding protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.426045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0272863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTAA CAAAAAATAA AAAACGTTTT ATCGCAGGTG CAAGTTGCCC AGAATGTAAT 
CAACTTGACA GCATCGCTCT GACACGGGAA AATGGAGTTG AAACTCTAAG GTGTGTATCT
TGTGGTTACA CACAAACACA AACACCGCAA CAAGCAACAT CGGCAACACG CCAATTTGAA
CAAATTATCG GTGTGTTTGA TCCGAATGAA ATTGAATAA
 
Protein sequence
MALTKNKKRF IAGASCPECN QLDSIALTRE NGVETLRCVS CGYTQTQTPQ QATSATRQFE 
QIIGVFDPNE IE