Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3197 |
Symbol | |
ID | 4624806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3950949 |
End bp | 3952865 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639798304 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_944483 |
Protein GI | 119946803 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.79023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0446478 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGTGG CTAGTAATAT TGAATTAATT CGCGGCGGTA AACCTTTACT TGTAAATGCC AGCGCAACAA TCAACCCACA CCAAAAAGTC GGATTAGTCG GTGCTAATGG CTGTGGTAAA TCAAGTTTTT TTGCACTTTT AAAGCAAGAA GCACAGATTG ATAATGGCGA GCTGAGTATT CCACAGCATT GGCGTATGGC AAGTGTCGCT CAAGAAACCC CTGCGCTCGA TATGAATGCG TTACAGTACG TTATTGACGG GGATTATGAT TTCAGATTGT TACAGCAGCA ACTTAAAGAA GCAGAGGCCG CTGATAACGG CAATAAAATA GCTGAACTGC ATGGTAAATT AGACCATGCG GGAAGTTATA CCATTGAATC CCGTGCCGCT GAATTACTCG CCGGTTTAGG CTTTCCAGAG CCGGATCAAA GTCGCTCAGT AAGTGATTTT TCGGGTGGTT GGCGTATGCG TTTAAATTTA GCACAAGCGC TACTTTGCCC TTCTGACTTA TTATTACTTG ATGAACCAAC CAATCACCTT GATTTAGATG CAGTCATTTG GCTTGAAAAA TGGTTACGTC AATATGCAGG CACATTAATC TTAATATCAC ATGACCGTGA CTTTATTGAT ACTATCGTTG ATAAAATAAT ACATATAGAG CAGCAGCAAC TTCATGAATA TACGGGTAAC TACAGCAGTT TCGAACGTCA ACGGGCTGAA AAGTTAGCAC AGCAGCAATC CTCTTTTGAA AAGCAGCAAA CGCAAATGAG TCATATGCAG GATTATATTG ACCGTTTTCG TTATAAAGCC AGCAAAGCGA AACAAGCACA AAGTCGTATT AAAGCATTAG AAAAAATGGA GCAATTATTA CCTGCACATT TGGATAATCA ATTTAGCTTT TCCTTTAGAG AGCCGGATTC CTTGCCGATG CCGTTATTAA CCTTAGAAAA AGTGAGTGCA GGTTATGACG ATTTATTGAT TCTTGATAAA ATAGAATTAA ATCTTGCGCC CGGCAGTCGA ATCGGTTTAT TGGGCCGCAA TGGTGCAGGT AAATCAACGC TTATTAAACT CATATCAAAC CAAATTAAAC CTATCTCGGG TAAATTGGAG ATCAATCCAA AGGCTAAAAT TGGTTACTTT GCCCAGCATC AATTAGAGCT TTTATCTCTG GATGAAACAC CACTTCAACA TCTTGCCCGG TTTGCACATG ATGAAAAAGA AGTCACCTTA CGAAATTTTT TGGGCACTTT TGGTTTTCAA GGGGATAAGG CGTTAGATAA AGTCAGGCCA TTTTCGGGGG GAGAAAAAGC GCGTTTAGTG TTGGCCCTGT TGGTGTGGCA AAAACCCAAC CTGTTATTAC TTGATGAACC GACCAACCAC CTTGATTTGG AAATGCGCCA TGCACTCACA ATGGCACTGC AAGAGTTTGA AGGTGCAATG GTAATAGTCT CGCATGACCG TCATTTGTTA CGCACCACAA CCGATGATTT ATATTTAGTG CATGATCATA AAGTAGAGCC TTTTGTTGGT GACCTTGATG ATTACCATAA ATGGTTATCA GAACAACAAC GTATTGAAAA ACAACCAGTT CAAGACCTTG AAAGTGTTAA CTCATCGACT GTTAATCGTA AAGAACAAAA ACATTTAGAA GCTGAATTTC GTAAAAAATT AACACCTTAT AAAAAGCAGT TAAGCAGTTC AGAAAAGTTA ATGGAAAAAT TGAGTCAACA ATTAGAAGAG ATAGAGAAGC AACTGGCAGA TCCTGCACTA TATGAACACG CACAAAAGGC ACGCTTAACT GAGTTATTAA AGCAGCAGGG CGAGTTAAAA GAGTCACTCG AAGAAGCGGA AATGGCTTGG ATGGATGCAC AGGAAAAAAT TGAATTAATG GAAGCTGAAT TTGAAGAGGT CATTTAA
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Protein sequence | MIVASNIELI RGGKPLLVNA SATINPHQKV GLVGANGCGK SSFFALLKQE AQIDNGELSI PQHWRMASVA QETPALDMNA LQYVIDGDYD FRLLQQQLKE AEAADNGNKI AELHGKLDHA GSYTIESRAA ELLAGLGFPE PDQSRSVSDF SGGWRMRLNL AQALLCPSDL LLLDEPTNHL DLDAVIWLEK WLRQYAGTLI LISHDRDFID TIVDKIIHIE QQQLHEYTGN YSSFERQRAE KLAQQQSSFE KQQTQMSHMQ DYIDRFRYKA SKAKQAQSRI KALEKMEQLL PAHLDNQFSF SFREPDSLPM PLLTLEKVSA GYDDLLILDK IELNLAPGSR IGLLGRNGAG KSTLIKLISN QIKPISGKLE INPKAKIGYF AQHQLELLSL DETPLQHLAR FAHDEKEVTL RNFLGTFGFQ GDKALDKVRP FSGGEKARLV LALLVWQKPN LLLLDEPTNH LDLEMRHALT MALQEFEGAM VIVSHDRHLL RTTTDDLYLV HDHKVEPFVG DLDDYHKWLS EQQRIEKQPV QDLESVNSST VNRKEQKHLE AEFRKKLTPY KKQLSSSEKL MEKLSQQLEE IEKQLADPAL YEHAQKARLT ELLKQQGELK ESLEEAEMAW MDAQEKIELM EAEFEEVI
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