| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3175 |
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| Symbol | |
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| ID | 4624721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 3908145 |
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| End bp | 3910034 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639798279 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_944462 |
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| Protein GI | 119946782 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACAA AACCAGTACA TCATAGGACA CATGAGACGA TGATAGTGCA GTCTTGGCAA
CGCTGTCGAG AGTCCGGACT GAACCATAAT TCAACGCCAA ATATTGACCG CCTAGCTGGT
GGCTCGCTGT CTTCATTGCT TGATGAACAT CATAGCCTTC TGACAACAAC TCATAATGAA
GTACTGCCCT ATTATGAAAA CTTACTGCTT AACAGTAAGA GCCAGGTAAT GCTCGCTGAC
CATCAGGGTT ACGTGCTTCA AAATTGGGGC GATCAGCGCT TTAAGCGCGA TAATCAAGAG
ATATTCACGC CCGGTAGTGG TTGGCAGGAA TCCACATTAG GAACAAATGC AATTGGTACT
GCGCTGAAAA CCGGCAACAT AGTGCAGATT GAGCGGGATG AACATTTTTT AATTTCCAAC
CGTTTTATGA CCGGATCAGC CGCCCCTATT TTTGGTATAG ACCGCGAGAT GCTTGGGGTA
ATCGATATAT CAACTGATAC TTACCTGCCT GAATCACATA CCTTAGGGCT AGTAAAAATA
ATGTCGCAAG CAGTAGAGAA TCAACTGATT ACCTCCCACT TTAAGGGCGA ATATTTTATA
CTGCGCTTTA ATACCAGCAT CGAGAATATT GATAGTCAGT GGTCAGGCTT AATCGTATTT
GATGAAAATG GTTTGGTTAT TTCAGCGAAT CACCGGGCAG AAATAATGCT CGGCTGTGAT
TTAAAACTCG TGAATATCTC TCAGCTATTT ATGATTAACG TCAGTCAGTT AGTCAACCAA
CCCGAAGGTT TTCAGGTGCC CTTAGTGACC ACGCAACAAT TCAGAGTACA TGGGATAGTG
CATAAGCCCG TACAGGCAAA ACCCCGAGCA TTGGATTTTA GAGCCGAGAT TAAGCCCGAG
AAATCAGCCA GGCATGTATC AGATCAACAC AGGTTTCAGT TAGATGAACT TAACCTTGGT
GATCCCGTGA TGGAGAAAGC TGTCGCTCAA AGCAAACGTA TTATTGACAA AAATATTCCT
ATTTTAATCT CCGGGGAAAC GGGTGTCGGC AAAGAAGTAT TTGTTAAAGC GATGCATTAT
TCAAGCCTGC GCAGCAAACA GAATTTGATT ACCGTAAACT GTGCCGCTAT TCCACAGGAG
TTAGTTGAAT CGGAACTTTT TGGTTATGAA AAAGGCGCCT TTACCGGCTC AAGCAGTAAA
GGTTATATAG GACTAATCCG CAAAGCCGAT AAAGGGACAT TATTTTTAGA TGAGATTGGT
GATATGCCAC TCAATGTTCA GGCGCGTTTA TTACGGGTAT TGCAGGAGCG CAGGGTGAAC
CCTCTGGGCA GCACCGAGTC TTATCCCGTC GATTTCAAGC TTGTTTCCGC GACCAACTGC
AATCTTAAAG AGTCCGTCGC AGCAGGTACC TTCCGTCAGG ATTTATATTA CCGGGTAAGT
GGTTTAAATA TAGAATTACC CGCACTCCGC CATCGCCGCG ACCGCCAGAA ATTGATCCAG
TTTCTCCTGA AATATTACGC AGAAAATAAA CAGCATACCG AGATCACAGA GCGTGCCATG
GATAGCTTTA ACCGGCACCC CTGGCCGGGT AACATTCGTC AATTGGTCAG TGTTATTCAA
ATTGCGCAGG CAATGTCAGA TAATGAACCG ATTGACTTTG AGCATCTCCC CGATGATTTT
TTTACTGATA TGGAAGCAAG TGAAAATCAC GGTGAGACTT TAATTGTCGG ACAGGAAAAC
AAACCATTAA CAGCTGCAAC GGATTCGAAC ACCAACAACA TAATAGCTTT ATATCAGTCG
CTTAATTGTA ATATATCAAA AACTGCAGCA CAGTTATCCG TGAGCAGAAA TACCGTCTAT
AAACGCCTGC GTGAGAGTGG TTTTAAATAA
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| Protein sequence | MPTKPVHHRT HETMIVQSWQ RCRESGLNHN STPNIDRLAG GSLSSLLDEH HSLLTTTHNE
VLPYYENLLL NSKSQVMLAD HQGYVLQNWG DQRFKRDNQE IFTPGSGWQE STLGTNAIGT
ALKTGNIVQI ERDEHFLISN RFMTGSAAPI FGIDREMLGV IDISTDTYLP ESHTLGLVKI
MSQAVENQLI TSHFKGEYFI LRFNTSIENI DSQWSGLIVF DENGLVISAN HRAEIMLGCD
LKLVNISQLF MINVSQLVNQ PEGFQVPLVT TQQFRVHGIV HKPVQAKPRA LDFRAEIKPE
KSARHVSDQH RFQLDELNLG DPVMEKAVAQ SKRIIDKNIP ILISGETGVG KEVFVKAMHY
SSLRSKQNLI TVNCAAIPQE LVESELFGYE KGAFTGSSSK GYIGLIRKAD KGTLFLDEIG
DMPLNVQARL LRVLQERRVN PLGSTESYPV DFKLVSATNC NLKESVAAGT FRQDLYYRVS
GLNIELPALR HRRDRQKLIQ FLLKYYAENK QHTEITERAM DSFNRHPWPG NIRQLVSVIQ
IAQAMSDNEP IDFEHLPDDF FTDMEASENH GETLIVGQEN KPLTAATDSN TNNIIALYQS
LNCNISKTAA QLSVSRNTVY KRLRESGFK
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