Gene Ping_3174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3174 
Symbol 
ID4624720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3906262 
End bp3907362 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content45% 
IMG OID639798278 
ProductABC transporter for sugar (glycerol) ATP-binding protein 
Protein accessionYP_944461 
Protein GI119946781 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGA CATTGGAAAA TGTAACCCAG ATAGTAGATG GCCAGTATTA TATTAATAAT 
GCCAACCTGA CTTTTGAAGC TGGCTCTTTT AATGTACTGC TTGGCCGCAC CTTATCTGGA
AAAACGAGCT TAATGCGTTT AATGGCCGGA TTGGATAAGC CGACTTCAGG CCGAGTGCTG
ATGAATGGAA TTGATGTAAG TGGTGTGCCA GTGCGCAAAC GTAACGTATC AATGGTTTAT
CAGCAATTCA TCAACTACCC AAGCATGACA GTGTTTGACA ATATCGCCTC TCCGCTGCGT
TTAGCTAAAG AATCGGAAGC TGTCATCAAA CAGAAAGTGA TAGAAATTTC CGATATGCTG
CAAATTACTC AGTTTCTTTC GCGCATGCCT CTAGAATTGT CGGGAGGACA GCAGCAACGC
ACCGCGATGG CGCGTGCATT GGTAAAAGAT GCCGATATTA TTTTATTTGA CGAGCCCCTC
GTTAACTTGG ATTATAAACT GCGCGAAGAG TTGCGTGAAG AGATGCGCGA ATTATTTGCT
CGGCGCAACA CTATTGCTGT GTATGCAACC ACCGAGGCTA ATGAAGCACT GGCGCTAGGA
GGCACGACTA CAATATTGCA TGAAGGGCAG ATTGTTCAGA GCGGTCCAAC CGCCGAAACC
TATCATAAGC CTTGTAATGT AGTTGCCGCG ACGCTGTTTA ATGAGCCGCC GATTAACATG
ATTTCCGGAC GTATCACTAA AACCGAAGTC ACCTTTGATA ACACCGTCCA TTTTCCGCGA
ACCAGCGAGC TTCAGGCTCT GCAGGAAGGC GACTATCAAT TTGGAATCCG CCCCAGCCAC
TTGAGTTTAT TACCTAAAAA TGACGATGAT CTGGAACTTT CAGTTCAGGT CGAAGTTGCT
GAAATAAGTG GTTCAGAGAC CTTTTTACAC GTGCGTAATC CGCATTTTGA AATGGTCCTG
CATTTATCCG GTGTGCATAA CTATACCGTA GATGAAAAAA TTAAAATTTA TGTACCCACC
CATAAACTCA ATGTATTTCA TGAGGATGGC CACTTAATCC AGGCATGTAG CCGCAGAGTT
GAGGATAATT ATCATGGCTG A
 
Protein sequence
MSLTLENVTQ IVDGQYYINN ANLTFEAGSF NVLLGRTLSG KTSLMRLMAG LDKPTSGRVL 
MNGIDVSGVP VRKRNVSMVY QQFINYPSMT VFDNIASPLR LAKESEAVIK QKVIEISDML
QITQFLSRMP LELSGGQQQR TAMARALVKD ADIILFDEPL VNLDYKLREE LREEMRELFA
RRNTIAVYAT TEANEALALG GTTTILHEGQ IVQSGPTAET YHKPCNVVAA TLFNEPPINM
ISGRITKTEV TFDNTVHFPR TSELQALQEG DYQFGIRPSH LSLLPKNDDD LELSVQVEVA
EISGSETFLH VRNPHFEMVL HLSGVHNYTV DEKIKIYVPT HKLNVFHEDG HLIQACSRRV
EDNYHG