Gene Ping_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3173 
Symbol 
ID4624719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3905160 
End bp3906269 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content44% 
IMG OID639798277 
ProductABC transporter ATP-binding protein 
Protein accessionYP_944460 
Protein GI119946780 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA TTCACTTAAA ATCATTAGCG CATAGTTACA ATAGAAATGC GGAAAAACCA 
GAATACGCAA TCCGAGAGAT GGATCATGTG TGGCATGACG GAGGTGCTTT TGCGCTATTA
GGGCCGTCTG GCTGTGGTAA ATCTACCCTG CTTAATATCA TTTCCGGTTT ATTGAAACCT
TCCGATGGTG AAGTGTTATT TAATGGTGTG AAAGTTAATG ACATTCTACC GCAAGACCGA
AACATTGCTC AAGTATTCCA GTTCCCGGTG GTCTACGACA CTATGTCGGT GTTTGATAAC
TTGGCCTTCC CGTTACGTAA TATGGGCGCG GGCGATGCCA AAATTCAATC CAAAGTAAGC
GAGATTGCCG AAATACTTGA GCTGACCGAT GTACTGAAGA AAAAAGCCGC CAATCTTACC
GCCGATGAAA AACAGAAAGT GTCCATGGGG CGCGGTTTGG TACGTGATGA TGTATCGGCT
ATTTTGTTTG ATGAGCCGCT GACGGTTATC GACCCGCAGT TAAAATGGAA ACTGCGCCGT
AAGTTGAAAC AGATTCACCA GAAGTTTAAG ACCACTATGG TCTATGTGAC TCATGATCAG
CTTGAAGCCT CTACTTTTGC AGACAAAATC GCCCTGATGT ACCAAGGCCA GGTGGTACAG
TTCGGTACAC CGCGCGAACT GTTCGAGCAG CCTAATCATA CTTTTGTCGG TTATTTTATT
GGCAGCCCAG GAATGAACTT TTTGGAAGTA AAACGCTGTG AGCAGGGTGT ATGTTTGGGT
GACAAAATAT TTCCACTCAA CGATTTAGAG AAACAGGCTC TGCAGATGAT CGATTCAAAT
AACCTGAAGG TGGGTATTCG ACCTGAATTT GTACATGTGT GGGATGATGC CGATGATAGT
GCTTACCGGG CTGAAGTCGA GTTTGTTGAA GACTTGGGTA CCTACAAAAT TGTCAGCCTG
AGATTGGGTG AGCATTTGAT TAAAGCCCGT CTGCAGGAGG ATCAGAAAGT CCCTAAAGAA
CACGCTTTTA TCAGTTTCCC TGAGCAGTGG TTAATGCTTT ATATCGACGA ATTTCTTGTC
GCCAAGGATG ATCATAATGA AGAAAACTAA
 
Protein sequence
MAEIHLKSLA HSYNRNAEKP EYAIREMDHV WHDGGAFALL GPSGCGKSTL LNIISGLLKP 
SDGEVLFNGV KVNDILPQDR NIAQVFQFPV VYDTMSVFDN LAFPLRNMGA GDAKIQSKVS
EIAEILELTD VLKKKAANLT ADEKQKVSMG RGLVRDDVSA ILFDEPLTVI DPQLKWKLRR
KLKQIHQKFK TTMVYVTHDQ LEASTFADKI ALMYQGQVVQ FGTPRELFEQ PNHTFVGYFI
GSPGMNFLEV KRCEQGVCLG DKIFPLNDLE KQALQMIDSN NLKVGIRPEF VHVWDDADDS
AYRAEVEFVE DLGTYKIVSL RLGEHLIKAR LQEDQKVPKE HAFISFPEQW LMLYIDEFLV
AKDDHNEEN