Gene Ping_3158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3158 
Symbol 
ID4626888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3887977 
End bp3889224 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content47% 
IMG OID639798262 
Productpeptide ABC transporter, protein inner membrane binding component 
Protein accessionYP_944445 
Protein GI119946765 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAGCA GTGTATTAGC CCGTTTCGGG CCAAAAGTTA AAAAATCGCA GGATGAATCT 
TACTATACAG CAGGCCAGCT GGCATTAATT AAAGCCCGCT TTATGCGTAA AACCAGCGGC
GTGGTTGCGG GTTGGGTGCT TGCCTCAATC ATTATGGTGA GTTTCTTTGC GCCGTTCTTT
GCGCCAATAG ATCCGACCAT TCGTGGTGCT GATACTAACT ATCAACGCGG TGCACCGCAA
GCTTTTTACT TCTGGGATGA ACAGGGTATT TCCTTACGTC CCTTTACTTA CACCTACAGT
AAAGATAAAC CTAAGATTGA TTTTATGGCG CTGGCGGGTA GTGGTGGATT GGCGGCATTG
GATGCGCTGA CTTCCAGTGG TGCTTTGAGT TCTTCCGCGC AGAACAAATA TAACATAGAT
GAGCAGCAGC GCCGTTATGT GCAGTTCTTT GTTAAAGGCT GGGAATATAG TCTGATTGAT
TTCAGTATTG CAGGCCTTAA TCTGGATCTT CGTTGGGATA GGCACTTGTT CGGCGTTGAG
CAGGGAGAAA TTCACCTGAT GGGCACCGAT CAGGACGGTA AAGATGTCTT TAGCCGTACC
CTGCATGCCG TATGGATTAC GGTGAGTATT GCCGTGGTGG CTTTGATTGT TAAGCTGTTT
ACTTCCTTGC TGGTGGGCGG TATCAGTGGT TACTTTGGCG GGCGTGTTGA TGCGGTATTA
ATGAGCTTTA CTGAGGCGGT ACGCGTTATC CCCTCAATCC CTGTTTATTT GGCCTGTGCT
GTTGCATTAT CAAGCATGGA TCTTACCGCA GTGCAGCGTT ACTTTGCGAT TGCTGTGGTT
ATCGGTGCAC TGGACTTTGC GACATTAGGG CGGCGTTTGC GCACCCATAT TCTGACCGAG
CGTAATCAGG ACTATGTATT GGCTGCACAG CTCTGCGGCT CAAGCAGCTG GCGGATTATC
TGGCGTCATC TGATACCCAG TTTTAGCAGT TATATTATCG TCGATACCTT AATCAATTTT
CCTTACGTTA TTCTGGCCGA AACCAGCCTT AGTTTTCTGG GACTCGGCTT AACTGAACCG
GTTAACAGTC TGGGTGTATT ACTGCAAAAA GCACAGGATC CGGACATCCA GCAAAATATG
ATCTGGCAGT TCTTTCCAGT ACTGGTTTTT GTGGTGTTAA TTATGGCTTT TGTGTTTGTG
GGGGACGCCT TGCGTGATGC CGCAGATCCT TATTCGGAGA AAAAATAA
 
Protein sequence
MISSVLARFG PKVKKSQDES YYTAGQLALI KARFMRKTSG VVAGWVLASI IMVSFFAPFF 
APIDPTIRGA DTNYQRGAPQ AFYFWDEQGI SLRPFTYTYS KDKPKIDFMA LAGSGGLAAL
DALTSSGALS SSAQNKYNID EQQRRYVQFF VKGWEYSLID FSIAGLNLDL RWDRHLFGVE
QGEIHLMGTD QDGKDVFSRT LHAVWITVSI AVVALIVKLF TSLLVGGISG YFGGRVDAVL
MSFTEAVRVI PSIPVYLACA VALSSMDLTA VQRYFAIAVV IGALDFATLG RRLRTHILTE
RNQDYVLAAQ LCGSSSWRII WRHLIPSFSS YIIVDTLINF PYVILAETSL SFLGLGLTEP
VNSLGVLLQK AQDPDIQQNM IWQFFPVLVF VVLIMAFVFV GDALRDAADP YSEKK