| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3148 |
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| Symbol | |
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| ID | 4626878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 3874758 |
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| End bp | 3876131 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639798252 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_944435 |
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| Protein GI | 119946755 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.127364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGGCA TCTCAATGTT TTTTACGGCG CTGCTTCTGT TACTGATCGG ATTCCCTGTT
GCTTTCACAT TTGCGGCTGT TGCTGTGTTT TTTGGCATGA TCGCAGGTAT CGTAGAAATT
TATTCTTACG GCGGATTTGA TGCCGGGCTG ATATCTGGTC TTATTGAGGG ACTCAATGAA
GGCGTAGCGA TGTTTGGCTA TATGCCATAT CGCATTTTTG CAATACAGCA AAATACAATT
TTAATGGCTA TTCCTATGTT TATCTTTATG GGCATAGTGT TACAAAAAAC AGGACTTGCT
GAAAAACTTT TAGAGTCCAT GGGCTTTCTA TTTGGTGAGA TTCGAGGTGG GATAGCAATT
TCAACTGTGT TGGTGGGCTC TTTATTAGCG GCATCCACCG GTGTTGTTGG CGCATCTGTT
GTGGCGATGG GAGTGATTTC ACTTCCGGTT ATGATGAAAT ATAAATACAG TACAGAATTA
GCCACAGGGA CTATCTGTGC GTCGGGTACG CTTGGACAAA TAATTCCTCC TTCAATAGTA
CTGATTATTC TTGGGGATGT GTTTCAAGTT CCGGTAGGAG ATCTTTTTAA AGCGGCTGTA
TGGCCAGCAC TAACGCTGGT TGCATCGTAT ATTGTCTATA TATTGATAGT TTCCTATATT
AAAAAAGATG TCGCACCCGC AATTCCTGCT GATCCTAGTC GTGGATCAAA GAAGAAACAG
GTATACAAAG CGCTTATTGA TATCATTCCA TCACTCACCC TGATTATTTT AGTGCTTGGT
TCGATTTTTG GAGGCATTGC AACGCCAACG GAATCTTCAG CTGTCGGATC AATTGGAGCG
GTCGGTTTAG CTTTGATGTA TAAAACTTTT TCAATAGACA TGATAAAAAT GGCAGCACAG
GAATCTGTCA AGATAACATC GATGGTTTTT GCTATTTTAA TCGGGGCGAC TGCCTTTTCA
ATGGTATTTT CTTATACTGG CGGAGAAGAG ATAGTTACCG AGTTTATGAA TAATCTGCCT
GGTGATAATA AGACTTCATT TATTCTCTTT ACCATGCTTG CTATCCTGAT TTTAGGGTTC
TTTATCGATT TTGTTGAGAT ATCCTATATT ATAGTGCCAA TTATAGTGCC AATAGCAGCA
GCTTTAGGAA TAAACCCCGT ATGGTTTGCA ATATTGATTG CGATGAATTT ACAAACGTCA
TTTTTGACCC CGCCGTTTGG ATTTTCACTG TTTTATTTAA AAGGTGTTGC ACCTCCATCG
GTGAGTACAG TGCAAATTTA TAGAGGTGTA ATACCCTTTA TACTGATACA AATTGTTGTA
TTAGGTGTTC TCGCTTTTTA TCCAGAATTC TTTGGTATTG ACTCAATGAT GTAA
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| Protein sequence | MIGISMFFTA LLLLLIGFPV AFTFAAVAVF FGMIAGIVEI YSYGGFDAGL ISGLIEGLNE
GVAMFGYMPY RIFAIQQNTI LMAIPMFIFM GIVLQKTGLA EKLLESMGFL FGEIRGGIAI
STVLVGSLLA ASTGVVGASV VAMGVISLPV MMKYKYSTEL ATGTICASGT LGQIIPPSIV
LIILGDVFQV PVGDLFKAAV WPALTLVASY IVYILIVSYI KKDVAPAIPA DPSRGSKKKQ
VYKALIDIIP SLTLIILVLG SIFGGIATPT ESSAVGSIGA VGLALMYKTF SIDMIKMAAQ
ESVKITSMVF AILIGATAFS MVFSYTGGEE IVTEFMNNLP GDNKTSFILF TMLAILILGF
FIDFVEISYI IVPIIVPIAA ALGINPVWFA ILIAMNLQTS FLTPPFGFSL FYLKGVAPPS
VSTVQIYRGV IPFILIQIVV LGVLAFYPEF FGIDSMM
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