Gene Ping_3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3125 
Symbol 
ID4625917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3845856 
End bp3847184 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content40% 
IMG OID639798237 
Producthypothetical protein 
Protein accessionYP_944420 
Protein GI119946740 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGAT CGCGAATAAA AAAATTGATG GAGTGGAAAG CAAAGAAAAG CCGCAAGCCT 
TTACTTATAG ACGGAGCGCG CCAGACAGGT AAAACCTACC TTCTGCAAAG TTTATTCGGT
GAAAGCTTTA ATCATGTCTT GCGCATCGAC TTTCTTGAAT CACCTGAAAT GACCGAAGCT
TTCTCAGGAT CATTGGCACC AGAAAATATA CTTTCAAATA TTGAACTGTT AACAAATGAA
GTATTTAACC CTGATACTGA TTTGCTGATT TTAGATGAAA TCGGTGAGTG CCAAAGAGCA
GTGACCTCTC TTAAATACTT TGCAGAAAAA GCACCAGAGA TGTACGTAGC AGCGAGTGGC
TCTAACATTG GGTTATTAAA TTCATTCCCT GTAGGAAAAG TTGAACAGAT CAACCTTCGC
CCGCTAACAT TCTATGAGTT TTTACTCGCA TCGGGGGAAG CTCCATTAAT TAAAGCTTTT
GAAACTCAAG CCAACTCAGC GCCTGCCCAT ACTAAGTTGT TTGATAAATT AACTGACTAT
TACTTTACTG GCGGCATGCC AGAAGCTGTC AGCACTTGGT TTGAATTAAA AAATAAAAGC
ATATTAGAGC GTGTTGAGGC AATAGAAAAT ATCCATGCAA ATCTGATTGC AGGTTACTTA
CGCGACTTTG GAAAGTACTC AGGGAAAATA GATGCTGGCT TGATCGAGTC TGTCTTTCGT
AATGTTCCTC CTCAACTTGC TTCTGTTATG GATGAATCGG TAAAACGATT TAAATTTAAA
GGCGTGCATC AACGCAAATC TCGCTATGGC GATTTTGAAA GTGCTATTAC TTGGTTAGAT
AAATGCCGAT TAATACTGAA GAACTACCCC ACAGATGGTA TGCCACGTAG TCCTTTAGCT
GCCTACCAAA AGGAAAACAG GGTTAAACTT TTCCTATTCG ATGTAGGATT ACTCAACCAT
ATGTTAGGGA GCAGTTACAA AGAGATTAAA CAACAAAACT TTGAATATAA GGGCTACATT
GCAGAGAATT TTGTGCAGCA GGAATTTGCC GCACAAGGAC TTGATCCAAC CTTCTCATGG
GGAGATGCAC GAGCAGAGAT TGAGTTTATC GCAACAAATG ATGAAGGGAA AATTATCCCT
ATAGAAGTGA AAAGTGGAAA ACGCACGCGA GCTAAGTCGT TGCAGTCTTA TATAACCAAG
TGCCAACCCC ATAAAACAAT CAAACTATCA GGAACACAGG GCTCTTCACC ATTAGAAAAA
GTGAATATCG TTTTGCCTCT TTACTATACC CAGTATGCTG TTAGCCAGTA CCTAAAATCG
AGCCAATAA
 
Protein sequence
MQRSRIKKLM EWKAKKSRKP LLIDGARQTG KTYLLQSLFG ESFNHVLRID FLESPEMTEA 
FSGSLAPENI LSNIELLTNE VFNPDTDLLI LDEIGECQRA VTSLKYFAEK APEMYVAASG
SNIGLLNSFP VGKVEQINLR PLTFYEFLLA SGEAPLIKAF ETQANSAPAH TKLFDKLTDY
YFTGGMPEAV STWFELKNKS ILERVEAIEN IHANLIAGYL RDFGKYSGKI DAGLIESVFR
NVPPQLASVM DESVKRFKFK GVHQRKSRYG DFESAITWLD KCRLILKNYP TDGMPRSPLA
AYQKENRVKL FLFDVGLLNH MLGSSYKEIK QQNFEYKGYI AENFVQQEFA AQGLDPTFSW
GDARAEIEFI ATNDEGKIIP IEVKSGKRTR AKSLQSYITK CQPHKTIKLS GTQGSSPLEK
VNIVLPLYYT QYAVSQYLKS SQ