| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3112 |
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| Symbol | |
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| ID | 4625904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 3829437 |
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| End bp | 3831923 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639798225 |
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| Product | ATP-dependent RNA helicase, DEAD box family protein |
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| Protein accession | YP_944408 |
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| Protein GI | 119946728 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.471561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCTA ATATAACTTT AATAGATAAA TTAACCACAG ACTCAATTAA AAGCGTTCAT
TTTAATGCTT TATATCAAAC ACTTTCGATT GCTTACGCAG ATAGCAAGCT TAAAATTCCG
TCGTTTATAA CATCAAAAAA AACTGATGAT TTATGTAGAT ATGCGGATAT CTTTAGTCTG
TCAGAAGAAT CTGAGTATAG AGTATTAGCT TATCGTATTA TTGTAAAATT ACTTGGAGTC
TCGGAGAAAA AGCCTGCTTT GGGTAGTATG GCTAGGTCTA TTTTCACCAA GCTTGGCCTG
TTTTTTTCCG AATCAAGATT TGATAAGGAT GAACATCCGT TGCCTTACGA GCGTGAAGTT
AGCAACATTC TAAAAAGAGA TAGACAGAAG TTGCCTTTCG GGAATGAAGT GTTTACAGAC
TCACAGTATG AAGTTTTTAC TAGTTTAACT GAGCTTGATA ACTTTAGTTT TTCAGGTCCA
ACGTCATTTG GCAAGTCATT TATAATTAGA AGCTATATAT TTGACTGTAT CAGTAATAAA
AAAAATGTAG TTATTTTAGT ACCTACCAAA GTACTCATTG AAGAATATAT AAGGGAAATC
AGAAAGACAA TAAAAGTTGA AGGCTGGGGT AATGTAAATT TATCAAAGAA TGCACAATCC
TATATTGAAG ATAAGATAAA TATCTTAATT TTAACTCCTG AACGATTCAA TAATTTAATT
TATACCGACT TAGAACTATC AATTGATGTA TTGGTTGTTG ATGAAGCACA CAAACTTGGT
GATGATGATG AGCGATCAAT GACATCCTTT AAAGTTATTC AAGAAACTAG AAAAAGATTG
CCTACTTGTA AAGTAATCTT TAGTTCTCCT GTTATAAGTA ATCCTTCAGT ATTCTTAGAA
TCGTTTGGGC TAGATGGTCG AAATTCAATT GAAGCAATAG AAGGTCCAGT AACACAGAAT
TTGTTTTTTA TCGATTTATT GAATAATAGT AGTCAGTTTT ATAATGAAGT AAGTAAAGAA
TTTTATACAC ATACAAAAGA GTTGAAAATT GAAGATATGT TTAGCTTCAT TCGGAGCGTT
ACTTCTAAAT CCTCACTAAT CTACTGTACT TCTAAATCAG GCTCAGTAAG TGATGCTGTA
TTATTTGCTG AGGACTTACC TTTATTAACG AATCCAAAAT TAGTTGCAGC ATCTAAAAAT
ATTAAAGAAT TGATTCATGA AGAGTATTTC CTTTCTGATT TATTGTTAAA AGGCGTTGCA
TTTCATAATG CTGACTTACC AAAAAATGTA CGAAGTATTA TCGAAAGTCT TTATCAATCT
CGTGAAATAG CTTACTTGTT TTGCACATCA ACTTTATTAG AAGGTGTTAA TTTACCAACA
GGTAATTTGT TTTTAAGATC GTTTAAAACT AGAGGCAAAA TTACTAACAA AACAAAGTTA
GATTTTTGGA ATCTAGCGGG GCGTGCCGGA AGATATACCA AAGAGTTAGA TGGCAACATT
TTTTGTATGC GAGACACTTC AAGTAGTTGG GGAAACATCT CAACTCTTGT TGAGAAAAAG
AATGAAGTGA AAGCTGACAC ATCTGCATTA AAACGCTTAA TGCGTGGTCG AAAGATTATT
AATGTACTAA AGGATGGTCC ATTAAATGAG GAGAAACAAG AAAGAATTAT GGATCAAATA
TCTAACATGA TTCTTTCAGA CTATATGGAG AATAAACAAA AAAATCATCC TTCAAGTTTG
ATGAACTTAG TACCAAAAAA GTTCCATAGT GGATTATTTA AAGTGTTAGA GGACAAACTT
AGAGATAGTG GGATCAATGA AGTACCACGG CAGTTATTTG CTATTGGGCA TAATATATCC
ATTGAGCGAC ATATAAACGT TCTTTCCGAT ATTAAAGAAC AGCCAGTAAT ATTGAGTTCA
TTAAACGGTA GCGATACTTA TCCGTTGTTT GAAAGGGTCT GCAAAGTTTA TAAGTTAAAG
TTCTCAACAG CTCAAATTAA TAGGCTTTAC CGCATTGCTC AACAATGGAT TCATGGTTTT
TCATTAAAGG ATATTATTAA TAATTCTTTG GATAATTGTT CAACTGTGGT TATTTATAGA
GGAGGGCCTA TCGAAAACTT CGACCGGACA AATAAGGCTC ATGTTAACGC TATAATCAAT
GGGGTCATCT CTTCTATAGA GCATGATATT GGTTATGAAT TGGAGTTATA CATAAACCAT
TATTATCAAC ATCTAGTTAA CTCTTTGGGG AGCGAGGGGG CAGGTATCAA TCTTTCAACC
TATCTAGAGT TAGGAACAAA TGACAAGTTT GAAATATCAC TACAAAATTA TGGATTTAGT
AGATCTGTTG CATCAGAGCT GATCAAGTTC TATAAGGAAT TTATAAAATT TGATGATGAG
AACGTTGTTG TATCTATCGA CACTGTAAAT CTTCTCGCAA GATTAGGTAA GAATAGTATT
GCTTTTACAG AAGTTGGTAA TGTTTAG
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| Protein sequence | MSANITLIDK LTTDSIKSVH FNALYQTLSI AYADSKLKIP SFITSKKTDD LCRYADIFSL
SEESEYRVLA YRIIVKLLGV SEKKPALGSM ARSIFTKLGL FFSESRFDKD EHPLPYEREV
SNILKRDRQK LPFGNEVFTD SQYEVFTSLT ELDNFSFSGP TSFGKSFIIR SYIFDCISNK
KNVVILVPTK VLIEEYIREI RKTIKVEGWG NVNLSKNAQS YIEDKINILI LTPERFNNLI
YTDLELSIDV LVVDEAHKLG DDDERSMTSF KVIQETRKRL PTCKVIFSSP VISNPSVFLE
SFGLDGRNSI EAIEGPVTQN LFFIDLLNNS SQFYNEVSKE FYTHTKELKI EDMFSFIRSV
TSKSSLIYCT SKSGSVSDAV LFAEDLPLLT NPKLVAASKN IKELIHEEYF LSDLLLKGVA
FHNADLPKNV RSIIESLYQS REIAYLFCTS TLLEGVNLPT GNLFLRSFKT RGKITNKTKL
DFWNLAGRAG RYTKELDGNI FCMRDTSSSW GNISTLVEKK NEVKADTSAL KRLMRGRKII
NVLKDGPLNE EKQERIMDQI SNMILSDYME NKQKNHPSSL MNLVPKKFHS GLFKVLEDKL
RDSGINEVPR QLFAIGHNIS IERHINVLSD IKEQPVILSS LNGSDTYPLF ERVCKVYKLK
FSTAQINRLY RIAQQWIHGF SLKDIINNSL DNCSTVVIYR GGPIENFDRT NKAHVNAIIN
GVISSIEHDI GYELELYINH YYQHLVNSLG SEGAGINLST YLELGTNDKF EISLQNYGFS
RSVASELIKF YKEFIKFDDE NVVVSIDTVN LLARLGKNSI AFTEVGNV
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