Gene Ping_3105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3105 
Symbol 
ID4624266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3817606 
End bp3819213 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content41% 
IMG OID639798218 
Producttransposon Tn7 transposition protein D 
Protein accessionYP_944401 
Protein GI119946721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0511559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAC TCGAACCGCT TGCTCATGAA AGTATTTATA GCTGGGTGGT TCGCTATCAT 
CTTCAAATAG GCGTTGGGCA TGAAAAAAAC ACTTACCGAC AGCTTTTTAA TTATGAAAAA
ATACGTATTC ATCCTTATCT GCCAAATCAT GTTCAGTGCC TAGATAAGCT CGGTGGTAAT
ACGGCTGATG TCTGGCTTGA AGATCATACG TTATATCCAC TATTTAAGTT TTTTGGCCAT
GATCTTAATA ACAAGCTCAA GCAGGCGATG CTGACACACA CCGGGAATAC AGTCTCTGCG
GCAAATATTG CCCAGTCTAG ACTGTGTTTC GAATATGGTC ATAAGTATTG TCCTGTATGC
CTCAAAGAAC ATTTAGAGCA GACTGGCATA CCACGCTATG ACATTCGCTA TCAAATCCCT
GGGATGACTG TCTGCCCCAG ACATAATTGC GAACTTAACA TAATAAAATG TGGCGATATT
GGTCTGGATA GGCGGCTCAC GTTTCCTAAA TCATTTGCCG TGATACCAAC ATTCAATCCG
CTTTTAATAA TCTTCGCACA ATTTTGCATG GATGTATTCG CCATAACAAA GCAACTTCCG
TGTGATCCTT TGTTATTGCA TCGTCTGTAT TGGCATCATC TTGAAAAGCG AAATTTAGTC
ACTTTAGGCA AACAGTTAAG AATGAGCCTA TTGGTGCTAG AGCTTGATAA TTTCTATCAA
GGTTTTGCAT TTACCGCCGG ATTAGAGTCA TTAAGTTCAT TTCATTTTTT AGGTCCATTA
CTCCGCTATA GGGCTCATAA ACCCAGTCAT CCTATAAAGC ATTTAATATT TGCATTTTGG
TTATTCGATA AAGACGCTTC ACTTTTTCAA TCTGAGCAAG ATAGTCAGCC ACAGCAGGTT
GAGTGCAGCG AGCAAATACA GGCTAAACCA GATGAAACAG GTATTATCGC CATGCTCAGA
AAAGGTCTCA GCATGGCCCA TATAGAAAAA ATAACGGGGA AAAGTCGCTG CTATATTCGT
CGGTTGTCAG AGATTAATGG GATTGAGCAT AAATCAAATC TGCAAGCGTT CTCAAATCGT
ATTAGGGTTA TGGTTATTTT AAAAGCAAAG CTTGGTTGGC ATAGAAAGGC TATTGCAGAA
GCGTTAAATG TAGGTTTAGG TTACGTAGAA CAAGTGATAT CCAATACAAA AAATCTCGTC
TTATGGCGCA AGAAACTCCA TGAGTTAAAA AATATAAATG CAGCTTTAAA GGAGCTGAGA
AGGGCGAAAG TATTGCACCC GAGTTGGCTC CGCAAAGATT TCAAAGCTCA GCATAACAAA
GCCTTTTTTT ACCTTTACCG CCATGACCGA GAACTCCTTG AGTCCACTCT CCCTGTAAAG
ACAAAGCCTC ATGTGCTGCG GCATGATTGG TCTATGGAGG ACGAAAGGCT TTCTCAAGCA
ATTTCCAACT TAGCGCCGGA TGATAATATG TCGCTCACGG CAATTGCTCA ACTGGTTCAT
GACAGGGGGC ACTTGAAAAG AAAGCTTGAT CATCTCCCTA AAACCAAAGC GTTGTTGATT
GAATTGGGGA AAGTGGCTAA GCCCCCCCAA AAAAACACCA GTAGATGA
 
Protein sequence
MKSLEPLAHE SIYSWVVRYH LQIGVGHEKN TYRQLFNYEK IRIHPYLPNH VQCLDKLGGN 
TADVWLEDHT LYPLFKFFGH DLNNKLKQAM LTHTGNTVSA ANIAQSRLCF EYGHKYCPVC
LKEHLEQTGI PRYDIRYQIP GMTVCPRHNC ELNIIKCGDI GLDRRLTFPK SFAVIPTFNP
LLIIFAQFCM DVFAITKQLP CDPLLLHRLY WHHLEKRNLV TLGKQLRMSL LVLELDNFYQ
GFAFTAGLES LSSFHFLGPL LRYRAHKPSH PIKHLIFAFW LFDKDASLFQ SEQDSQPQQV
ECSEQIQAKP DETGIIAMLR KGLSMAHIEK ITGKSRCYIR RLSEINGIEH KSNLQAFSNR
IRVMVILKAK LGWHRKAIAE ALNVGLGYVE QVISNTKNLV LWRKKLHELK NINAALKELR
RAKVLHPSWL RKDFKAQHNK AFFYLYRHDR ELLESTLPVK TKPHVLRHDW SMEDERLSQA
ISNLAPDDNM SLTAIAQLVH DRGHLKRKLD HLPKTKALLI ELGKVAKPPQ KNTSR