| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3089 |
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| Symbol | |
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| ID | 4624028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 3794699 |
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| End bp | 3796882 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639798204 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_944387 |
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| Protein GI | 119946707 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0619898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAATA TTCAACATTT AATAACCGGT ATTACGGGCA GAATCACATC GCGTTTTTTG
CTTTTCGCGG CACTGTCGAT CCTAATTATT GCCGCTATTG GCTATATCAA GATCTACCAA
GTTACCGCGA ACAACTCAGA AATCCGAATT GGACGCGCCG CGCATGCCGC AGCAGTCATC
TTGTCCGAAC GCTTTGCGGA GGAATTTACT GCGGTATTCG ATGACCAGGG TAATGTGAAG
GCAATCCAGC TCAAAGGCGA TACCGCTGCA ACATCCCTGT CTTTTCGCGA CGAGTATGAT
GTCATTCTAA AGGACATAGG GTCGACTAAT CACGGTGCGG CTAACCTTTT TAAGTTCAAC
TCTCAAACCA AGGCGTTTGA TCGTTTTGTC ACGACCTTCC GGAAACCTGA TGGCTCCATG
CCACCACCGA TGTCTATCAG TGTCGGTCAC CCCGCCTATA AAAATATTAT CAATGGTCGG
ATCCATCGCG GGCAAGTGCC CGTTATGGGG CGTTTAAGAT TAGCAGAGCT GATGCCGATC
ATAGCCTTGG ACAAATCGGT GAAAGGCGTG CTTGCCGTTG ACGTGGGCTG GGTTGATGAC
TTGATCGCCG CGCGGGATGA GTTGCGCAAC CAAAGCATAC TGGTTGCCGG CATAATCCTT
ATTTTGGAAG CCCTTCTCGG CGCCGCCTAT ATCAGTCACG CACTCAGGCC AATTCGGGTT
TTGGCAAAAT ATGCTGAGGA TATGGCCTCT GAAAAAGTCT TGGGAAGCGT ACCCTTCCTC
GGCCAAAGCG ACGAGGTCGG CGCACTGTCC GAAGGCCTTA ATCGTGTGGC TGGCCTGCAG
AGTAAACTCG CTCATCTGGC CTATACAGAC GAGCTCACAG GTCTTGGTAA TCGCAGCCGT
TACCTTGCTG ATCTTCAGGT GGCTTTGAGG GAGAGCCAAT CGGGCAACGG ATCTTGGGTA
TTGTTACACC TCAGCATCGA CAAATTTAGC CACCTCAATG ATGCCTATGG GCAGGAAATG
GGCGATAAGA TTCTCAAAAG GCTTGGGTCT AGAATTCAGC AGGTTGCAGG AAATCAGGCA
AAGGTAGCGC GTCCCAGCGC AGCTGATTTT TCTATCATTA TCGATAATCG TCTGGCAACT
GACAAAATTA CAGTGCTCGC CCAAAACCTT ATTGAGACCA TGCGCAAAGG GTTCCAGACT
CAGGTTGGCA AAATTTTCAT AACCGGTTCA ATAGGTGTAA TCGATGTGCT CAAAGATTTT
GATGAGCCTG ACGAGGCACA TCTCAATGGG AATTTAGCGC TTCGCAAAGC CCAGAGAGCA
GGAGGCGATC AATATGCGAT TTTCTCCTCA GAATTAAACG ACGAGCACCA AGAACGGGTG
ACGTTGATAA AAATACTTGA GATGGCGATC GAAAAAAGGG AGATCGAGAT CCATTTCCAG
CCACAGATCA TTCTGTCATC TAATAAATTA GCTGGGTTAG AAGCCCTCGC CCGCTGGAAC
CACCCAAGCT TGGGTCAGAT TCCACCCGCT AAATTTATTC CTATCGCCGA AGACAGCGGG
CAGATTGTCA AGCTTGGCAC CCTGATCATT GATATGGCAT GCCAACAAGC GGCGCAATGG
CGTAAGGCAA ACTTCGACTT TAAACATATT GCAGTCAATG TCTCACCCAT CCAGTTATGG
CAGGACAATT TTATCGACGT TTTGAGTGCT GCATTAGAAA AATACAAACT GCCGGCTAAT
TGTATCTGCA TCGAAATTAC AGAAAGTGTG TTTATCGACA ATACCAAACA CAACACGCTA
CGGGTTCTAG AGCTTATTCG ATCACTTGGT GTGATGCTAT CACTCGATGA TTTCGGCTCG
GGCTATTCAT CGCTAAGCTA TCTCAACAAC ATGCCCTTCA ATCAGCTGAA AATTGACAGT
AGCTTCGTCA CCAATATTGA TATAGATAGC CGCAAGCAGA AGGTCATGCG GGGTATTCTT
TCACTCACGA CTGAGCTCGA CTTTAAAGTT ATTATTGAAG GAACAGAAAC TATTGAGGAA
ATCATGATGG TTCAAGAAAT GGGATGTGAT GTAGTTCAGG GCTACTATTA TGCCAAGCCT
GCACCTGCTG CTCTCATTCC TGGCATCGTG AACCAGGTTT TCAGGTCAGT GTTAGCAATT
GACGCTAAGC TGTCGAAAGA CTGA
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| Protein sequence | MINIQHLITG ITGRITSRFL LFAALSILII AAIGYIKIYQ VTANNSEIRI GRAAHAAAVI
LSERFAEEFT AVFDDQGNVK AIQLKGDTAA TSLSFRDEYD VILKDIGSTN HGAANLFKFN
SQTKAFDRFV TTFRKPDGSM PPPMSISVGH PAYKNIINGR IHRGQVPVMG RLRLAELMPI
IALDKSVKGV LAVDVGWVDD LIAARDELRN QSILVAGIIL ILEALLGAAY ISHALRPIRV
LAKYAEDMAS EKVLGSVPFL GQSDEVGALS EGLNRVAGLQ SKLAHLAYTD ELTGLGNRSR
YLADLQVALR ESQSGNGSWV LLHLSIDKFS HLNDAYGQEM GDKILKRLGS RIQQVAGNQA
KVARPSAADF SIIIDNRLAT DKITVLAQNL IETMRKGFQT QVGKIFITGS IGVIDVLKDF
DEPDEAHLNG NLALRKAQRA GGDQYAIFSS ELNDEHQERV TLIKILEMAI EKREIEIHFQ
PQIILSSNKL AGLEALARWN HPSLGQIPPA KFIPIAEDSG QIVKLGTLII DMACQQAAQW
RKANFDFKHI AVNVSPIQLW QDNFIDVLSA ALEKYKLPAN CICIEITESV FIDNTKHNTL
RVLELIRSLG VMLSLDDFGS GYSSLSYLNN MPFNQLKIDS SFVTNIDIDS RKQKVMRGIL
SLTTELDFKV IIEGTETIEE IMMVQEMGCD VVQGYYYAKP APAALIPGIV NQVFRSVLAI
DAKLSKD
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