Gene Ping_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3087 
Symbol 
ID4624026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3792043 
End bp3793155 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content53% 
IMG OID639798202 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_944385 
Protein GI119946705 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.138011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACG AAAATCAGAA AGACGTATTG TTCGATACAT TTAAGCTGGG CAACCTGTCG 
CTGCGAAACC GCGTGCTGAT GTCTCCGCTA ACCCGCTCGC GCTCCAGCCA GCCGGGTGAT
ATACCCAATG CGATGAACGT CCAGTACTAT GAGCAGCGTG CCAGTGCAGG CCTTATCATC
AGCGAAGCGA CCCAGGTATC GCCACAGGGC AAGGGCTACG CTTTTACCCC GGGCATTCAC
TCGCAAGAGC AGATTGCCGG CTGGAAGCGG GTCACCGACG CAGTTCATAA AGCGGGCGGT
CTTATTCACA TGCAGCTTTG GCATGTTGGC CGGATTTCTC ATCCGGACCT GCAACCCGAT
GGCCAAAAGC CAGTTGCTCC CTCTGCGATT GCACCCAAAG GTGCTAAAAC CTTTGTCAGT
GCAACTTCCG GTATGGTGGA TATTCTTGAG CCACGTGCTC TGGAAACAGA TGAGATCCCC
TCTATCGTTG AGCAGTTCAG GGTTGGTGCG GAGAATGCTA AAGCCGCAGG CTTTGATGGT
GTTGAAATCC ATGCTGCCAA CGGCTACCTG CTGGATCAGT TTCTTAAGAG TGACAGCAAC
CAGCGTACCG ATCAGTATGG TGGCTCCGTC GAAAATCGTA TCCGTCTAAC CTTGATGGTA
ACTGAGGCCG TTGTCGAGGT CTGGGGCAAA GAAAACGTTG GTATTCGCGT TAGCCCAACC
GGGAGTTTTA ACGCAGTGCA TGATCAGAAC CCAATTGAAA CTTTTGGCAC GCTGGCTAAA
CATCTGAACG ATATCGGTAT TGCTTATATC GAGGTGGTGG AAGACTCGTT TCAGGGCAAC
CATGCCAATG GTCGACCGCA GACTGTGATT GATGCTATTC AGGCGGCTTT TAAAGGTGTA
TACATCGCCA ATGGCGCCTA CACCGCGGAC GAAGCAAGAA CGCGGATAGG TAAAGGCCAG
TGTGACCTGG TCACTTTTGG ACGCCCATTC ATCGCCAATC CGGATCTGCC TGAACGCTTC
CGAACCCATG CAGAGCTTAA CCGCTGGGAC GACAGCACTT TCTACGGTGG TGACGCTGAG
GGTTACATCG ACTACCCAAC GTTGTCTGTT TAA
 
Protein sequence
MSNENQKDVL FDTFKLGNLS LRNRVLMSPL TRSRSSQPGD IPNAMNVQYY EQRASAGLII 
SEATQVSPQG KGYAFTPGIH SQEQIAGWKR VTDAVHKAGG LIHMQLWHVG RISHPDLQPD
GQKPVAPSAI APKGAKTFVS ATSGMVDILE PRALETDEIP SIVEQFRVGA ENAKAAGFDG
VEIHAANGYL LDQFLKSDSN QRTDQYGGSV ENRIRLTLMV TEAVVEVWGK ENVGIRVSPT
GSFNAVHDQN PIETFGTLAK HLNDIGIAYI EVVEDSFQGN HANGRPQTVI DAIQAAFKGV
YIANGAYTAD EARTRIGKGQ CDLVTFGRPF IANPDLPERF RTHAELNRWD DSTFYGGDAE
GYIDYPTLSV