Gene Ping_3071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3071 
Symbol 
ID4626101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3771297 
End bp3771632 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content44% 
IMG OID639798186 
Producthypothetical protein 
Protein accessionYP_944369 
Protein GI119946689 
COG category[S] Function unknown 
COG ID[COG1872] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00251] conserved hypothetical protein TIGR00251 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0227257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCG ATGGCAAGAG AGTTAAAATG TCTTCATTTT GTGTTATGGA GGGAGAAATA 
CTGGTTGTGA ATATTCTTGG AACACCTGGC GCGAAGAAGG ATGCTGTCGG AAAGGCGCAG
GGAATTCAGC TGAGGGTTCG TGTTACTGCA ACGCCTGTCG CCGGCAGAGC AACTGATCAT
ATGGTTAGAT TTCTCGCGAA AGAATTTAGT GTTTCACCCG ATGATATAAC AGTTGTTTTT
GGTCGGTTGA ACATCAATAA ACAGTTGCGT ATCAAAGCGC CGAAAAAAAT GCCTTCCGTA
GTGGCAAAAG CGCTTTCAAA AAAAGACAGT GCCTAA
 
Protein sequence
MAFDGKRVKM SSFCVMEGEI LVVNILGTPG AKKDAVGKAQ GIQLRVRVTA TPVAGRATDH 
MVRFLAKEFS VSPDDITVVF GRLNINKQLR IKAPKKMPSV VAKALSKKDS A