Gene Ping_3047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3047 
Symbol 
ID4626060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3744929 
End bp3746800 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content44% 
IMG OID639798165 
Productpotassium efflux system protein 
Protein accessionYP_944348 
Protein GI119946668 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.864029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.194006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCA CAATAAGAAA CCTTATGACC GAATATTTTG TTTATGCTTT TATTTATCTG 
GCTGCTGCTG TAATAGCTGT CCCTATTGCG ACACGCTGCG GACTCGGTTC AGTGCTCGGG
TATTTAATCG CAGGGGTGGT GATCGGCCCG ATTATTGGTT TAGTGGGTGA TGAGACCAGC
AGTATTAAAC ACTTTGCTGA ATTTGGGGTT GTCCTGATGC TGTTTTTGGT CGGTCTGGAA
CTCGAACCAA AACTGCTTTG GAAAATGCGT AATCGCCTGC TGGGATTAGG TGGACTTCAA
GTTATTTTAA GCACCCTATT AGTGATGGGG ATTGCATTCT ATTTTGTCGA TCATTGGGCA
ACCGCCTTAA CGATTGGTTT GATTTTGTCA CCTTCTTCAA CAGCGATTGT GCTGCAAACC
TTTAATGAAA AAGGGTTAAG CAAAACAACA GGTGGCAAAA ATGCCTTTTC AATTTTGCTC
TTTCAGGATA TAGCGGTTAT TCCGATGCTG GCATTAATAC CCTTAATGGC TTTGCCCGAA
CTTATCGAAA AATCACAGCA GCTGGCATCA ACCGCAGCGC AGCAAAACGA GCACTTAAGT
TTAGTGGCAG GCTTACCGAG CTGGGCTTAC GCACTGACCG TTGTCACCTC CATTATAGCG
GTCGTCTCTG GTGGACACTA TTTAAGCCGC CCTTTATTCA GATTTGTCGC CAGCTCAGGT
TTACGAGAAA TGTTCACCGC CTCGGCATTG ATGCTGGTGA TCGGCATCGC TGCATTAATG
AGTTTAGTGG ATTTATCCCC CGCCCTGGGC ACTTTTTTAG CGGGTGTTGT ATTGGCAAAC
TCAGAGTTTC GCCATGAATT AAAATCTAAT ATTGAGCCCT TTAAAGGGCT TTTACTGGGA
CTGTTTTTTA TTACCGTTGG CGCAGGGATA GATTTTAATC TTTTATATTC TGACTTTATG
GTGATCCTCA CGCTAACCCT CGGCATCATC TTATTAAAAG CGACTGTTTT ATTTTTTCTG
GCGATAATAT TTAAAATTAA GAACAGTGAC CGTTGGTTGT TTGCCTTGAG CCTCGCCCAA
GCGGGTGAGT TTGGTTTGGT TTTATTAAGC TTTACGGTAC AGCAGCATGT TTTACCCTCG
GCAATGGCCG CGCCTTTATC ACTGGTTATT ACGCTATCCA TGTTTCTGAC ACCCGCCCTG
TTTATTTTCT TCGAAAAGGT TATTTTACCG CATCATCAGC AAACCAGTAA CCGCCGCGCA
CAAGATAAAA TAGATCAAAC AGGCTCTGTA ATTATTGCCG GAGCGGGTCG ATTTGGACAG
GTAGTTAATC GCTTACTGGT CGCCAATAAT GTCCCCACGG TAGTGATCGA TCATGAGTCA
AGCATGATCG ATCGCTTAAG GCAGGTTAAT GTAAAAAGTT TTTACGGGGA TGTAACACGC
CCGGATATTA TGCGTACCGC AGGCATTGAG CAGGCAAAAT TATTAATTGT TTCGATCGAC
GATAAAATAC GTGCCACTGA GTTAGTTAAC TATATAAAAC ACACTCACCC GCAGGTAAAA
ATTCTCGCAC GCGCTTATGA TCGCGGTCAT TATTATTCAC TTGCCCACGC CGGGGCCGAC
TATATTATCA GTGAAACCTA CCTGTCCGCT GTAGAGTTGG GAACACAAGC CTTGAAAGAT
TTAGGCTTTG CTCAAGATAA TGTCACTAAC CTGCGCCATA AATTCATGAA TGCAGAGGTA
AAAGGCAGCC GTTCTTTATA CAAAATATGG CAGGAAAGCA GCTCCGAACA CACTTTTGAT
AGTGACTACC AGCAACTCTT TATCGAGCTT GAAGAGGAGT TAAGTGAGAT CATGGATGAA
AATGAAAGCT AA
 
Protein sequence
MTTTIRNLMT EYFVYAFIYL AAAVIAVPIA TRCGLGSVLG YLIAGVVIGP IIGLVGDETS 
SIKHFAEFGV VLMLFLVGLE LEPKLLWKMR NRLLGLGGLQ VILSTLLVMG IAFYFVDHWA
TALTIGLILS PSSTAIVLQT FNEKGLSKTT GGKNAFSILL FQDIAVIPML ALIPLMALPE
LIEKSQQLAS TAAQQNEHLS LVAGLPSWAY ALTVVTSIIA VVSGGHYLSR PLFRFVASSG
LREMFTASAL MLVIGIAALM SLVDLSPALG TFLAGVVLAN SEFRHELKSN IEPFKGLLLG
LFFITVGAGI DFNLLYSDFM VILTLTLGII LLKATVLFFL AIIFKIKNSD RWLFALSLAQ
AGEFGLVLLS FTVQQHVLPS AMAAPLSLVI TLSMFLTPAL FIFFEKVILP HHQQTSNRRA
QDKIDQTGSV IIAGAGRFGQ VVNRLLVANN VPTVVIDHES SMIDRLRQVN VKSFYGDVTR
PDIMRTAGIE QAKLLIVSID DKIRATELVN YIKHTHPQVK ILARAYDRGH YYSLAHAGAD
YIISETYLSA VELGTQALKD LGFAQDNVTN LRHKFMNAEV KGSRSLYKIW QESSSEHTFD
SDYQQLFIEL EEELSEIMDE NES