Gene Ping_3041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3041 
Symbol 
ID4626054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3740848 
End bp3741672 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content44% 
IMG OID639798159 
Productpyrroline-5-carboxylate reductase 
Protein accessionYP_944342 
Protein GI119946662 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0345] Pyrroline-5-carboxylate reductase 
TIGRFAM ID[TIGR00112] pyrroline-5-carboxylate reductase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.439498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACATA AGAAAATTAC CTTTATTGGT GCCGGCAACA TGGCCGGCAG TATAATCAGC 
GGATTAGCTA AATCTGGCTA TCCTGCGGAT TTGATCTGTG CATGTGCACC CAGTGCGAAC
AATACACAAA AACTAGCAGA CCAATTTTCA ATTCAGGCCA GCCAAGACAA TGTGACTGCA
GTCGATTGGG CCGAAGTTAT TGTGCTAGGC GTTAAACCGC AAATGATGGC AGATGTTTGT
CAGGCGATGG TTGACCAGGG CGCAGATTTT AGCAATAAGT TAGTTATCTC CATTGCGGCT
GGTATCTCTG TACAGCGCCT GCAGTCTTTA TTAGGCGAGA AAGCCCAAAT TATTCGCACT
ATGCCTAATA CCCCAAGCTT ATTACAAAAA GGAATGACCG GGTTATTTGC ATCGGAACAG
GTAAGCGAAG AATATAAAAC CTTTGCGGGC GACTTGATGT CAGCTGTGGG TGAGACAGTC
TGGGTAAAAG AAGAAAGCAT GATTAATTCC GTTATCGCCG CGTCAGGATC TTCACCTGCG
TACTTCTTCC TGTTTATGGA AGCGATGCAG ACAAAAGCAA TAGAAATGGG CTTTGATCCG
GAACAAGCAC GTTTATTAGT GTCGCAAGCC GCACTGGGCA GCATTGAAAT GGTCAAACAA
AACCCAGATA TCTCTATTGG TAAGCTTCGT GAAAACGTCA CTTCTAAAGA AGGATCAACT
GCAAAAGCGC TTGATACTTT TAATGAATTA CAATTAACTG AAATCGTCGC TAAAGCGATG
CAGGCAGCTT CTGATCGTGG TGAAGAAATG GAAAAATTAT TCTAA
 
Protein sequence
MLHKKITFIG AGNMAGSIIS GLAKSGYPAD LICACAPSAN NTQKLADQFS IQASQDNVTA 
VDWAEVIVLG VKPQMMADVC QAMVDQGADF SNKLVISIAA GISVQRLQSL LGEKAQIIRT
MPNTPSLLQK GMTGLFASEQ VSEEYKTFAG DLMSAVGETV WVKEESMINS VIAASGSSPA
YFFLFMEAMQ TKAIEMGFDP EQARLLVSQA ALGSIEMVKQ NPDISIGKLR ENVTSKEGST
AKALDTFNEL QLTEIVAKAM QAASDRGEEM EKLF