Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3027 |
Symbol | |
ID | 4625113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 3725236 |
End bp | 3726456 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639798145 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_944328 |
Protein GI | 119946648 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAGAA AATATTTTTA TTCTAATCAT TCACAGGTAT CTTTCATGAA AAAAATAAGC CTTCTGGTTA CCGCGCTCAT TTTCAGCTTT AACCTATTTG CAAACCCAAC AATAACGCCA AGTGCACCGG AAATTGGCGC AAAGGGATAT CTGCTTATTG ATTTTAATTC AGGAAAAGTA CTTTCTGAAA ATAATAGTGA TGTAAGACTT AATCCAGCCA GCCTTACAAA AATGATGACC AGTTATATCA TTGGCCAGGA AATTAAATCC GGCAACTTAT CACCCGACGA TAAAGTGACT ATTTCCGAAA AGGCGTGGTC AAAAAATTTC CCTGAGTCTT CTAAGATGTT TATTGAAGTG GGTAAGGAAG TGAGCGTCGC CGACTTAAAT CGTGGCATTA TCATACAATC AGGTAATGAT GCCTGTGTGG CGATGGCTGA ATATATCGCC GGTAGTGAAG GTGCCTTTGC AGATTTAATG AATTCTTGGG CAGCCCAGTT AGGAATGAAT AATACGCAAT TTAAAAATAG CCACGGTTTA ACAGCTGAGG GTCACTACAC AACACCGCAT GATATGGCTA TCTTGGCGCA AGCATTAATT AATGATGTGC CCGATGAATA CCTTATATAC AGTGAAAAAT CATTTAAATT TAATGGTATT GATCAACCAA ATCGTAACGC TTTATTATGG GACAAAAGTT TAGACGTAGA TGGTATCAAA ACAGGCCATA CCAACGAGGC AGGTTACAGC TTGATTTCTT CGGCAACCAA AGATGGCATG CGTCTAATCA GTGTAGTAAT GGGCACCCGT TCAACTTCTG CACGTCTAAC CGAAAGTAAA AAATTACTCA ATTGGGGATT CCGCTTTTTT GAAACGCTGA CTCCTTACAA TGCTGGCGAC CAATTAGCGA ATGAAAGAAT TTGGATGGGT AGCCAGCCAA TGATTCGATT AGGCGTAAAA GATGATACGC CTATTACGCT GCCAAGAGGT GAGGCCAAAA ATTTAACCGC TAATTTTATT ATTGAAAATG AATTGCGCGC CCCCATCCAA AAAGGTGATG TGGTCGGCAA GGTAAACTAT TCAGTGACGG GTCAACAGAC AGTGGATGAC GAACCGATTG CGACCTACGA TCTGATCGCC TTAGAAACCG TGGAAGAAGG TGGTTTATTT AGTCGCTTGA TAGATTATAT TAAGTTATTA TTTATTGGTT GGTTTAGCTG A
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Protein sequence | MIRKYFYSNH SQVSFMKKIS LLVTALIFSF NLFANPTITP SAPEIGAKGY LLIDFNSGKV LSENNSDVRL NPASLTKMMT SYIIGQEIKS GNLSPDDKVT ISEKAWSKNF PESSKMFIEV GKEVSVADLN RGIIIQSGND ACVAMAEYIA GSEGAFADLM NSWAAQLGMN NTQFKNSHGL TAEGHYTTPH DMAILAQALI NDVPDEYLIY SEKSFKFNGI DQPNRNALLW DKSLDVDGIK TGHTNEAGYS LISSATKDGM RLISVVMGTR STSARLTESK KLLNWGFRFF ETLTPYNAGD QLANERIWMG SQPMIRLGVK DDTPITLPRG EAKNLTANFI IENELRAPIQ KGDVVGKVNY SVTGQQTVDD EPIATYDLIA LETVEEGGLF SRLIDYIKLL FIGWFS
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