Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3024 |
Symbol | |
ID | 4625110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3722437 |
End bp | 3723075 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639798142 |
Product | heme exporter protein CcmA |
Protein accession | YP_944325 |
Protein GI | 119946645 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCACT GCAAAATGCT GACGGTTGTC CGTGAGGATC GTATTTTATT CAAAGATCTA AGCTTTACCA TCAAACCGGG TGAGATAGTG CAGATTGAAG GACCTAATGG CGTAGGTAAA ACAAGCCTGT TTCGGTTGCT AATAGGTTTG TCCACGCCGT ATTCAGGTGA TATTTTTTGG CAAGGCTCCT CAATAGATAA AGATCGTGAA TTTTTTTACC AGCAGCTTTT ATATCTGGGT CATAAATCAG GTATAAAACC TGAGTTAACC CCTTTAGAAA ATTTACAGTT TTTTCAGACG TTACATGCTG CAGAGCAAGA TATTGATTTG TGGTTTGTTT TAGCACAGGT TGGGTTGGCA GGTTATGAAG ATGTGACAAC GGCTCAGCTT TCTGCCGGAC AACAACGCCG GGTGGCTTTA GCCCGATTAT GGATTAATAA ATGCCCGTTA TGGGTATTAG ATGAACCTTT TACCGCCATT GATAAGTCAG GTATCGCCGT GTTGGAGTCT TTATTTATAA AGCATGCAGA AAAAGGGGGG ATTGTTCTCC TCACTACACA TCAGGATCTG AGGCTCGATG CTTCATTGTT ACGGAAAATT CAATTAGGTG GGGTTGCTGC CGGTGAAGAA TATGTTTAG
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Protein sequence | MLHCKMLTVV REDRILFKDL SFTIKPGEIV QIEGPNGVGK TSLFRLLIGL STPYSGDIFW QGSSIDKDRE FFYQQLLYLG HKSGIKPELT PLENLQFFQT LHAAEQDIDL WFVLAQVGLA GYEDVTTAQL SAGQQRRVAL ARLWINKCPL WVLDEPFTAI DKSGIAVLES LFIKHAEKGG IVLLTTHQDL RLDASLLRKI QLGGVAAGEE YV
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