Gene Ping_3024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3024 
Symbol 
ID4625110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3722437 
End bp3723075 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content42% 
IMG OID639798142 
Productheme exporter protein CcmA 
Protein accessionYP_944325 
Protein GI119946645 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component 
TIGRFAM ID[TIGR01189] heme ABC exporter, ATP-binding protein CcmA 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCACT GCAAAATGCT GACGGTTGTC CGTGAGGATC GTATTTTATT CAAAGATCTA 
AGCTTTACCA TCAAACCGGG TGAGATAGTG CAGATTGAAG GACCTAATGG CGTAGGTAAA
ACAAGCCTGT TTCGGTTGCT AATAGGTTTG TCCACGCCGT ATTCAGGTGA TATTTTTTGG
CAAGGCTCCT CAATAGATAA AGATCGTGAA TTTTTTTACC AGCAGCTTTT ATATCTGGGT
CATAAATCAG GTATAAAACC TGAGTTAACC CCTTTAGAAA ATTTACAGTT TTTTCAGACG
TTACATGCTG CAGAGCAAGA TATTGATTTG TGGTTTGTTT TAGCACAGGT TGGGTTGGCA
GGTTATGAAG ATGTGACAAC GGCTCAGCTT TCTGCCGGAC AACAACGCCG GGTGGCTTTA
GCCCGATTAT GGATTAATAA ATGCCCGTTA TGGGTATTAG ATGAACCTTT TACCGCCATT
GATAAGTCAG GTATCGCCGT GTTGGAGTCT TTATTTATAA AGCATGCAGA AAAAGGGGGG
ATTGTTCTCC TCACTACACA TCAGGATCTG AGGCTCGATG CTTCATTGTT ACGGAAAATT
CAATTAGGTG GGGTTGCTGC CGGTGAAGAA TATGTTTAG
 
Protein sequence
MLHCKMLTVV REDRILFKDL SFTIKPGEIV QIEGPNGVGK TSLFRLLIGL STPYSGDIFW 
QGSSIDKDRE FFYQQLLYLG HKSGIKPELT PLENLQFFQT LHAAEQDIDL WFVLAQVGLA
GYEDVTTAQL SAGQQRRVAL ARLWINKCPL WVLDEPFTAI DKSGIAVLES LFIKHAEKGG
IVLLTTHQDL RLDASLLRKI QLGGVAAGEE YV