Gene Ping_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3023 
Symbol 
ID4625109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3721776 
End bp3722444 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content41% 
IMG OID639798141 
Productheme exporter protein CcmB 
Protein accessionYP_944324 
Protein GI119946644 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID[TIGR01190] heme exporter protein CcmB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGCG CATTTTTTCA AGTCGTTGCT AAAGAGTTAA AAGGGGCTTT TCGTCACGGC 
AGTGATATTT TAAATCCGGT TTGGTTTTTT ATTATTGTTG TCACGCTCTT CCCCTTAGGT
ATTGGTACAG ATCCCGCTTT ACTGCAGCGC ATTGCACCCG GTATTATTTG GGTGGCTGCA
TTATTGGCGG CTTTATTATC CTTTGAGCGC TTATTTAAAG ATGATTTTAT TGACGGTTCA
TTAGAGCAGT TGATGTTGTC CCCTTTTCCG CTTGCGTGGC TGGTCAGCGC GAAGGTTTTT
TCTCACTGGT TACTGACAGG GTTGCCTCTT TTATTGGTTT CTCCGCTACT GGCGGCTTTT
TTATCACTTG ATATTGATAC CTATTTTGCA TTATTTTTAA CGCTTTTAAT CGGTACGCCC
ATTTTGAGTT TATTTGGTGC TATTGGTGTT GCACTGACAG TTGGCTTAAG AAAAGGGGGG
ATCCTATTGA GTTTAATTAT GCTCCCGCTT AGTATTCCCA TTTTAATTTT TTCGACAATG
GCGATTGATG CCGCATCCTA TGGACAATCC TATATAGGGT TATTAGCTTT ATTAGGGGCA
ATGTTAATTA CCGCCATTAT TTTAGCGCCT TTTGCAATAG CAGCATCATT GCGTGTCAGC
GTCAGTTGA
 
Protein sequence
MFSAFFQVVA KELKGAFRHG SDILNPVWFF IIVVTLFPLG IGTDPALLQR IAPGIIWVAA 
LLAALLSFER LFKDDFIDGS LEQLMLSPFP LAWLVSAKVF SHWLLTGLPL LLVSPLLAAF
LSLDIDTYFA LFLTLLIGTP ILSLFGAIGV ALTVGLRKGG ILLSLIMLPL SIPILIFSTM
AIDAASYGQS YIGLLALLGA MLITAIILAP FAIAASLRVS VS