Gene Ping_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3022 
Symbol 
ID4623806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3720947 
End bp3721705 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content42% 
IMG OID639798140 
Productheme exporter protein CcmC 
Protein accessionYP_944323 
Protein GI119946643 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID[TIGR01191] heme exporter protein CcmC 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAAAT GGCTGCATCC TTATGCAAAA CCTGAAAAGA GTTATCAATT AGCGGGCAAA 
CTATTACCCT GGTTTGTTGT TCTGACAATA ATTACATTTA TAATTGGCTT GCTGTGGGGA
CTGTTATTTG CCCCTGCAGA TTATCAACAA GGTGATAGTT TTCGAATAAT TTATATTCAT
GTCCCCGCGG CTATGATGGC GATGGGGGCG TATTCCAGCA TGGCTATTGC CGCCTTTGTG
GCTTTAGTGT GGCAAATTAG ACTGGCAGAA ATGACCGTTG CAGCAATGGC TCCCGTGGGT
GCGGTGTTTA CTTTTATTGC CCTGTTTACC GGTGCTGCAT GGGGAAAACC TATGTGGGGG
GCATGGTGGG TTTGGGATGC ACGTTTGACC TCAGAGCTGA TATTACTGTT TATCTATTTA
GGTATTATTG CTTTATATAA TGCATTTTCT GATAAAGTAT TAGCCGGCAG AGCCGCTTCA
ATCTTGACCT TAGTGGGAGT GATTAACTTA CCTATTATTC ATTACTCTGT TGTGTGGTGG
AACACCTTGC ATCAGGGGCC AACTATCAGT AAATTTGGCA AACCATCCAT GGCACTGGAA
ATGTTATGGC CCTTACTGAT TATGATTTTA GCTTTTGCGA CTTTATTAGG GGCGTTAACC
TTGATGCGCT TTCGAAATGA AATTTTAGCA CGTGAAAGTC ATCGTCCCTG GGTAAGGCAG
TTAGCGTTAA ACAATGTTAA AATGACGGGA AAAAATTAA
 
Protein sequence
MWKWLHPYAK PEKSYQLAGK LLPWFVVLTI ITFIIGLLWG LLFAPADYQQ GDSFRIIYIH 
VPAAMMAMGA YSSMAIAAFV ALVWQIRLAE MTVAAMAPVG AVFTFIALFT GAAWGKPMWG
AWWVWDARLT SELILLFIYL GIIALYNAFS DKVLAGRAAS ILTLVGVINL PIIHYSVVWW
NTLHQGPTIS KFGKPSMALE MLWPLLIMIL AFATLLGALT LMRFRNEILA RESHRPWVRQ
LALNNVKMTG KN