Gene Ping_3021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3021 
Symbol 
ID4623805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3720739 
End bp3720945 
Gene Length207 bp 
Protein Length68 aa 
Translation table11 
GC content36% 
IMG OID639798139 
ProductHeme exporter protein D (CcmD) 
Protein accessionYP_944322 
Protein GI119946642 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3114] Heme exporter protein D 
TIGRFAM ID[TIGR03141] heme exporter protein CcmD 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTA ATTCATGGGC AGATTTTTTT GCAATGGGGG GCTACGGTTT TTATGTTTGG 
TTGGCTTACG GTATCTCTTT TTTAGCGCTA GCTGTTTTAA TCCTCAATAC CCTAACAAAA
AGAAAAAAAA TATTAAAAAC TGTCAATCAG CGTATCGCAC GTGAAGAGCG AATAAAGAAA
GCAAAAAACA GGAAAGGTAC ATTATGA
 
Protein sequence
MAFNSWADFF AMGGYGFYVW LAYGISFLAL AVLILNTLTK RKKILKTVNQ RIAREERIKK 
AKNRKGTL