Gene Ping_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3017 
Symbol 
ID4623801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3717208 
End bp3717750 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content38% 
IMG OID639798135 
Productcytochrome C biogenesis protein 
Protein accessionYP_944318 
Protein GI119946638 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTGA CTTCAGTAGA TCTACATGTT CAAAATAATC GCTTTAAAAC AGTTAATTTC 
AGCGCTTATC TGTTTTGTCT CATGTTTTTT TTCAGCCCTT TAGCTTTTAG TGCGACTGAT
CTTTTTGAGT TTGATAATGC ACAACAAGAA CAGACTTTTC ATGACTTAAC AAAGCAGTTA
CGTTGCCCTA AATGTCAGAA TCAGAATATT GCCGATTCTA ATGCAGAGCT CGCGGAAGAT
TTACGCAACA AAACCTATGA ACTGGTGAAA GAAGGCAAAA ATGAAGAGCA AGTTATTGCC
TATATGGTTG CCCGTTACGG TAACTTTATA CGTTATGATC CGCCGATGAC ACCTGCGACT
ATTTTCCTGT GGCTTGGTCC TTTGTTGTTT ATTTTGGTAG GGTTCTACTT TATATATGCT
CTGGTAAAAC GACAAAAAAA ACAGGCGCCA CAGTTAGATC CTGACGAAGA ACAGCGTTTG
CAAAAAATTC TGGGTGATAA AAAACCCACA GATAAAAAGT CACAAAAAGG GAATAAGCAA
TGA
 
Protein sequence
MQLTSVDLHV QNNRFKTVNF SAYLFCLMFF FSPLAFSATD LFEFDNAQQE QTFHDLTKQL 
RCPKCQNQNI ADSNAELAED LRNKTYELVK EGKNEEQVIA YMVARYGNFI RYDPPMTPAT
IFLWLGPLLF ILVGFYFIYA LVKRQKKQAP QLDPDEEQRL QKILGDKKPT DKKSQKGNKQ