Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_3005 |
Symbol | |
ID | 4623789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3704849 |
End bp | 3705901 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639798123 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_944306 |
Protein GI | 119946626 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.275238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACCC TTATTGTTAA TAAATTAAGT TGTTTTTATC AAAAGAACCA AGTGCTTAAT TCTCTGGATT TAGAACTCGC AAATAATGAA ATAGTGTGTT TATTAGGGGA GAGTGGCTGT GGTAAAACAA CCCTGTTAAG GGCGATTGCC GGGTTACAGC TCGATCTTTC CGGCGAGATA CAAATAAATG CTAAAACCGT TAATAATACA GGCATTAATA TTCCACCGGA AGAACGAAAA GTAGGTTTGA TTTTTCAGGA TTATGCACTT TTCCCCCATC TTAATGTTTT TGACAATATC GCGTTTTCAT TACAGAAACT GAGCCGTAGC GAGCAACGAA AACTGGTTAC TGAAGTATTA ACCCTGGTAC GACTAAAGGA TTATGCCGAT CGTTTTCCAC ATCAACTTTC CGGCGGACAG CAGCAGCGTA TTGCGATTGC CCGTGCGCTG GCTTATCAAC CTGAATTAAT GCTATTAGAT GAACCTTTCT CGAACTTAGA CCCGCATGTT CGTTTTCAGT TAATCGATGA AATCAGACAG TTACTTAAAG CGCATTCCAT GAGCGCATTA TTTGTTACTC ATTCTAAAGA GGAAGGTTTT GCTTTTGCAG ATAGAATTGC TTTGATGCGG TCGGGTAAAA TAGTGCAGAT TGATACTGCT CAAATGTTAT ACAGTCATCC CAACTCAAGG TATGTGGCTG ATTTTATGGG CTTGAGTAAT TATCTCAGGG TCACGGTAAA GGATAAATAC TCTTACCAGT CCGATCTTGG TTTACTCAAC TGCAATGCTA TTATTGAACA CCCAATAAAT ACACCATTAA CCCTGTTATT ACGACCCGAG CAGCTCGCAG TTGAAGTTGA TCCCGTTGGC AAAGGGACTA TCAAAAAGGT TGATTTCTTA GGCGCATACC AGCATGTCAG CATTGTCTAT TTAAGTAAGC ATTATATCGT TAAGCAGAGT AATCATTATG GTAACTGTAT GCAGTTGAAG GTCGGAGATA AAATTTCGTT GATTGTATTA AGCCATGATT TTGTTGCCTT CCAAACAGAA TAA
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Protein sequence | MSTLIVNKLS CFYQKNQVLN SLDLELANNE IVCLLGESGC GKTTLLRAIA GLQLDLSGEI QINAKTVNNT GINIPPEERK VGLIFQDYAL FPHLNVFDNI AFSLQKLSRS EQRKLVTEVL TLVRLKDYAD RFPHQLSGGQ QQRIAIARAL AYQPELMLLD EPFSNLDPHV RFQLIDEIRQ LLKAHSMSAL FVTHSKEEGF AFADRIALMR SGKIVQIDTA QMLYSHPNSR YVADFMGLSN YLRVTVKDKY SYQSDLGLLN CNAIIEHPIN TPLTLLLRPE QLAVEVDPVG KGTIKKVDFL GAYQHVSIVY LSKHYIVKQS NHYGNCMQLK VGDKISLIVL SHDFVAFQTE
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