| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2988 |
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| Symbol | |
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| ID | 4623679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 3686795 |
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| End bp | 3687967 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639798106 |
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| Product | ABC transporter inner-membrane translocator |
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| Protein accession | YP_944289 |
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| Protein GI | 119946609 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.641521 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATT TACTTCATTC ACCTGGTTTT AAAAAACTTA ACAGTTTACA TTTTGTGATT
GCGATTTTAT TTATCACAAC CCTGTATGTG ACAGTGTGTA ACTTAGCCTT TGCACCCGGC
TCATTTTTTT ATGTCAGTAA TTATACTGTC TCCCTGCTCG GAAAATATCT TTGTTATGCC
CTGCTCGCAC TGGCAGTCGA TTTAGTCTGG GGATATTGCG GTATTTTAAG CTTGGGCCAC
GGCGCTTTTT TTGCGCTCGG CGGTTATGCT ATGGGGATGT ATCTGATGCG CCAGATAGGC
GATCGCGGTG TCTACGGCAA CCCGGATCTG CCCGATTTTA TGGTCTTTCT AAATTGGACT
GAATTGCCCT GGTACTGGGC GGGCTCGGAT AATGTCCTGT TTATGGTATT ACTGGTCTTT
GCCGGCCCCG GACTGCTTGC ATACATTTTC GGTACGATGG CCTTTCGCTC CCGGGTAAGC
GGTGTCTACT TGTCGATTAT AACCCAGGCA ATGACCTATG CACTGATGCT GTCATTCTTC
CGTAATGAAA TGGGCTTTGG CGGTAATAAT GGCTTAACTG ATTTTAAAGA GATTTTTGGT
TTTTCATTGC AGTCACCGGA TACCAAACTG GCACTGTTTG TCGCCACAGC CGTTGCACTG
GCTTTTGGAT ACGCAGTCAG CCATTTTATT GTTAACTCAA AAATGGGCCG AGTGGTCACC
GCGATTCGCG ATGCTGAAGA CCGAGTGCGT TTTGTTGGTT ATAAACCCCA ACATTACAAA
GTGTGGATTT TTGTTGTCTC GGCAATGCTG GCAGGTCTGG CGGGTGCACT CTATGTCCCC
CAGGTCGGCA TGATCAATCC CGGCGAATTT TCACCTCTGA ATTCCATTGA GATTGTTATC
TGGGTCGCCA TCGGCGGACG CGGCACTTTA TATGGCGCAA TTATTGGCGC AGTCGTGGTC
AGTTATGCAA AAACACGTTT TACCGCGATT ATGCCCGAAG TATGGCTATT TGGACTGGGT
GGCCTGTTTG TTTTAGTCAC CCTGTTATTA CCCAAAGGAA TTGCGGGTCT GTTTGCCAGT
GTGCTCAATA AACTCGATCC ACCCACACAG CCGGCAAACG AGCCACAAGC CCCCTCCACC
ACTGCAACTA CAGCCGCGGA GAGTAAATCA TGA
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| Protein sequence | MKNLLHSPGF KKLNSLHFVI AILFITTLYV TVCNLAFAPG SFFYVSNYTV SLLGKYLCYA
LLALAVDLVW GYCGILSLGH GAFFALGGYA MGMYLMRQIG DRGVYGNPDL PDFMVFLNWT
ELPWYWAGSD NVLFMVLLVF AGPGLLAYIF GTMAFRSRVS GVYLSIITQA MTYALMLSFF
RNEMGFGGNN GLTDFKEIFG FSLQSPDTKL ALFVATAVAL AFGYAVSHFI VNSKMGRVVT
AIRDAEDRVR FVGYKPQHYK VWIFVVSAML AGLAGALYVP QVGMINPGEF SPLNSIEIVI
WVAIGGRGTL YGAIIGAVVV SYAKTRFTAI MPEVWLFGLG GLFVLVTLLL PKGIAGLFAS
VLNKLDPPTQ PANEPQAPST TATTAAESKS
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