Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2986 |
Symbol | |
ID | 4623677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 3683779 |
End bp | 3685056 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639798104 |
Product | ABC transporter for branched chain amino acids substrate binding protein |
Protein accession | YP_944287 |
Protein GI | 119946607 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.199519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTA AAAAGCTTAT TTTAGCCAGT TCAATTGTTG CGACGGGGTT AATGACCAAT TTAACCTATG CAGCAGAGAA CATCAAAGTC GGCGTATTAC ATTCTTTATC AGGCACTATG GCTATCAGTG AAACAACACT CAAAGATACC GTGCTGATGA TGATAGCGGA TCAAAATGCC AAAGGCGGTC TGCTTGGCAA AAAACTGGAA GCAGTGGTCG TTGATCCAGC TTCAAACTGG CCTCTTTTTG CTGAGAAAGG ACGCGAGCTG CTTGCCAAAG AAAAAGTCGA TGTTATTTTC GGCAGCTGGA CTTCTGTATC GCGTAAGTCT GTATTACCTG TCCTTGAAGA GCTCAATGGA CTGATGTTCT ATCCGGTTCA GTATGAAGGT GAAGAGTCAT CGCAAAATGT ATTTTACACC GGCGCTGCAC CAAACCAGCA GGCTATTCCT GCGGTTGATT ACCTGATGAA TGATATCGGG GCAGAACGTT GGGTATTACT AGGTACAGAT TATGTCTACC CGCGTACCAC CAATAAAATA TTAGAAGCTT ACCTGTTATC AAAAGGGGTC GAAGCGAAAG ATATTATGAT CAACTACACA CCTTTCGGTC ATTCAGACTG GCAGAATATT GTTGCTGATG TGAAAACATT TGGCTCAACA GGTAAGAAAA CAGCTGTTGT ATCAACCATT AACGGTGACG CTAATATCCC CTTCTACAAA GAACTGGGTA ACCAGGGCAT TTCAGCTGAA GATATTCCTG TAATGGCATT CTCTGTCGGT GAAGAAGAGC TGTCTGGTTT TGATACCACT CCGCTAGTGG GCCACTTAGC AGCTTGGAAC TACTTCCAAA GTGTTAGAAC AGAAGAAAAC GACAAATTTA TCAAAAGCTG GAAAAAATTT ATTGGCGATG ATGAACGCGT GACTAATGAT CCGATGGAAG CGACCTATAT AGGTTTCAAA ATGTGGGTCA AAGCGGTTGA GAAAGCGGGT ACGACGGACG TTGATGCCGT TGAACAAGCG ATGATTGGCA TAGCAGTACC TAACTTAACC GGCGGCATTG CCGTGATGAA CGCCAACCAC CATTTATCTA AGCCTGTACT GATTGGTGAA ATTCAAGCAA ATGGTCAGTT TGAAGTCGTT TGGTCAACAC CTGATACAGT TATCGGTGAT GCATGGTCAG ATTTTCTACC CGTCTCTAAA GACTTAATCT CAGATTGGAC TGCCCCCGTG AGCTGTGGCA ACTTTAATAT CAAAACAGCT AAATGCTCTG GTGAATAA
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Protein sequence | MKFKKLILAS SIVATGLMTN LTYAAENIKV GVLHSLSGTM AISETTLKDT VLMMIADQNA KGGLLGKKLE AVVVDPASNW PLFAEKGREL LAKEKVDVIF GSWTSVSRKS VLPVLEELNG LMFYPVQYEG EESSQNVFYT GAAPNQQAIP AVDYLMNDIG AERWVLLGTD YVYPRTTNKI LEAYLLSKGV EAKDIMINYT PFGHSDWQNI VADVKTFGST GKKTAVVSTI NGDANIPFYK ELGNQGISAE DIPVMAFSVG EEELSGFDTT PLVGHLAAWN YFQSVRTEEN DKFIKSWKKF IGDDERVTND PMEATYIGFK MWVKAVEKAG TTDVDAVEQA MIGIAVPNLT GGIAVMNANH HLSKPVLIGE IQANGQFEVV WSTPDTVIGD AWSDFLPVSK DLISDWTAPV SCGNFNIKTA KCSGE
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