Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2972 |
Symbol | |
ID | 4624776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3665468 |
End bp | 3666247 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639798090 |
Product | undecaprenyl diphosphate synthase |
Protein accession | YP_944273 |
Protein GI | 119946593 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.906819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAACTA ATGTTCCGCT ATTTTTCAAT TCATCAAGGT TGATTGTGAC CACATCAAAT GAAAATTTAA AACATGCCAG GCATGTCGCT ATTATTATGG ACGGAAATGG TCGCTGGGCA CAAAGCAAAG GTAAGCATCG TGTATTAGGG CATAAGCACG GCGTTCAATC TTTACGTCGG GCAATTGCTT TTGCAAGCGA GCAAAAGCTT GAAGCATTAA CCTTGTTCGC CTTCAGCAGT GAAAATTGGC AACGCCCGGT GCAGGAAGTT GATATGCTGA TGGCGCTTTT TTTTACTGTA TTAAGCAGTG AAGTCAAAAA ATTACAGAAA AACAATATTA AACTTAAAGT GATTGGTGAG TTGTCCGGAT TTAGCGAAGG GCTACAAAAA AAAATCATTG AAGCTGAAAA TAGAACCCAA GCTAATACTG GTTTAGTGGT CAATGTTGCC GCAAATTATG GTGGCCGCTG GGATATAACG CAGGCAACCA AAAAGTTAGC TACTTTAGTG GCGGCAGGTA AGCTTAAGGT AGAAGATATC AATGAGCAGC TGCTTAATAA CGTTACCTGT TTGGCAGAAT TACCGCCAGT GGATCTTCTA ATCCGCACGG GGGGGGACCA ACGTATTAGT AACTTTATAT TATGGCAACT GGCTTATGCG GAATTTTATT TTACCGATGT TTTGTGGCCG GATTTTGATG GTCAAGAATT TCAATATGCG CTAGATGTAT TTTCAAGTAA AGAACGCCGC TTTGGAAAAA CCGGTGCACA ACTAAGTTAA
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Protein sequence | MLTNVPLFFN SSRLIVTTSN ENLKHARHVA IIMDGNGRWA QSKGKHRVLG HKHGVQSLRR AIAFASEQKL EALTLFAFSS ENWQRPVQEV DMLMALFFTV LSSEVKKLQK NNIKLKVIGE LSGFSEGLQK KIIEAENRTQ ANTGLVVNVA ANYGGRWDIT QATKKLATLV AAGKLKVEDI NEQLLNNVTC LAELPPVDLL IRTGGDQRIS NFILWQLAYA EFYFTDVLWP DFDGQEFQYA LDVFSSKERR FGKTGAQLS
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