Gene Ping_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2972 
Symbol 
ID4624776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3665468 
End bp3666247 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content41% 
IMG OID639798090 
Productundecaprenyl diphosphate synthase 
Protein accessionYP_944273 
Protein GI119946593 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.906819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAACTA ATGTTCCGCT ATTTTTCAAT TCATCAAGGT TGATTGTGAC CACATCAAAT 
GAAAATTTAA AACATGCCAG GCATGTCGCT ATTATTATGG ACGGAAATGG TCGCTGGGCA
CAAAGCAAAG GTAAGCATCG TGTATTAGGG CATAAGCACG GCGTTCAATC TTTACGTCGG
GCAATTGCTT TTGCAAGCGA GCAAAAGCTT GAAGCATTAA CCTTGTTCGC CTTCAGCAGT
GAAAATTGGC AACGCCCGGT GCAGGAAGTT GATATGCTGA TGGCGCTTTT TTTTACTGTA
TTAAGCAGTG AAGTCAAAAA ATTACAGAAA AACAATATTA AACTTAAAGT GATTGGTGAG
TTGTCCGGAT TTAGCGAAGG GCTACAAAAA AAAATCATTG AAGCTGAAAA TAGAACCCAA
GCTAATACTG GTTTAGTGGT CAATGTTGCC GCAAATTATG GTGGCCGCTG GGATATAACG
CAGGCAACCA AAAAGTTAGC TACTTTAGTG GCGGCAGGTA AGCTTAAGGT AGAAGATATC
AATGAGCAGC TGCTTAATAA CGTTACCTGT TTGGCAGAAT TACCGCCAGT GGATCTTCTA
ATCCGCACGG GGGGGGACCA ACGTATTAGT AACTTTATAT TATGGCAACT GGCTTATGCG
GAATTTTATT TTACCGATGT TTTGTGGCCG GATTTTGATG GTCAAGAATT TCAATATGCG
CTAGATGTAT TTTCAAGTAA AGAACGCCGC TTTGGAAAAA CCGGTGCACA ACTAAGTTAA
 
Protein sequence
MLTNVPLFFN SSRLIVTTSN ENLKHARHVA IIMDGNGRWA QSKGKHRVLG HKHGVQSLRR 
AIAFASEQKL EALTLFAFSS ENWQRPVQEV DMLMALFFTV LSSEVKKLQK NNIKLKVIGE
LSGFSEGLQK KIIEAENRTQ ANTGLVVNVA ANYGGRWDIT QATKKLATLV AAGKLKVEDI
NEQLLNNVTC LAELPPVDLL IRTGGDQRIS NFILWQLAYA EFYFTDVLWP DFDGQEFQYA
LDVFSSKERR FGKTGAQLS