Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2968 |
Symbol | |
ID | 4624772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3659241 |
End bp | 3661649 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639798086 |
Product | surface antigen (D15) |
Protein accession | YP_944269 |
Protein GI | 119946589 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.270101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.279532 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAA AATTTTTACT TACTGGTGCA TTAATAATCG GCAGTTGTAT TTCGGGATTT TCGTTTGCAG AAAAATTTAC TGTTTCTGAT TTGCAGTTTG AAGGTCTGCA GCGAGTGACT TTAGGTGCAG CTCTGCTCAG TTTGCCTATT CGGGAAGGTG ATGCTGTTGA CGATTATACA TTAGGAAAAG CGTTAAAACA GCTTTATGCC AGCAGTTATT TTGAGTCTAT TGAGTTACTC AGACAGGGTG ACGTTTTAAT ATTCAAAGTA AAAGAACGTC CTACAATCAG TAATGTAGAA CTCTCCGGAA ATAAAAAGCT CAGCGAAGAA CAAATTTTTG ATTCGCTTAA ATCATCCGCG CTGAAAGTTG GCGAATCTCT GGATCGTACG ACGCTCTCGG GAATTGAAAA AAGTCTTGAA GATTTTTATC ATAGTGTGGG TAAATACAGC GCCAAAGTTG AGACTGTCGT TACGGCATTG CCACGTAATC GCGTCTCGAT TAAATTTAGA TTTAAAGAAG GCCGCACGGC AAAAATTGAG CAGATAAATA TTGTCGGTAA CAATGCTTTT ACGGATCAAG ATTTATTAAA ACGCCTGACC CTAAGTGATT CCGGTGGTTG GTGGGACTTC TTTGCTGATG ATAGTTACCA AAAACAAAAA CTGGCGGGTG ATCTTGAAGT TATCAAAAGT TATTATTTGG ACCGTGGTTA TATTCGTTTT TCTATTGATG AATCGCAGGT CGCATTAACG CCCGATAAAA AAGGCGTTTA CGTGACCGTT AATATTAATG AAGGGAAAAT ATATAGCGTT TCTGATGTCA AATTTATCGG CAATCTGCTC GGTTATGATG ATGATATTGC ATCCTTGGTG CCTTTTAAGC GCGGTGATAC TTATGCGGCT TCCGATATTA CTTTTGCAGA ACAAAGTATT CGCAAGTACT TTGGCCGCTT AGGCTATGCC TATCCGGAAA TTACGACTTA TCCTGAAGTT AACGATGCGA CAAACACTGT TGCTATCAGT TTTTCTGTGG ATCCGGGATC TCGTGGTTAT GTACGCCACA TCAATATTTC TGGTAATACA ACAACAAAAG ATGTGGTTAT ACGCCGAGAG ATGCGTCAAA TGGAAGGGGG TTGGTTATCA AGCGAAAATA TTGAAACCTC AAAATCGCGC TTAAATCGCC TTGGATTTTT CTCTAAAATT AATATTAATA CAGAAAGAGT GAGTGATGAT TTAGTTGATT TAAACCTTAA CGTCGAAGAG CAGGCTTCTG GTTCATTTAA TGCAGGTATC GGATATGGTA CCGAATCCGG GATGAGTTTA ACTGCTGGGG TGCAGCAGAA TAACTTTTTA GGTTCGGGTG ATAAAGTTGG CTTTGAAGTA AAAACCAACC AATATAACCT CAGTGCAAAT GTTAACTATA CGACGCCTTA TCTGACTAAA GATGGCGTGA GTGCCGGTGG TCGACTCTTT TATGATAAAT TTGAAGCAGG TGATGCAAAC ATTGTTGATT ATACCAACAC AACTTATGGC GTGCGTTTAA ACAGCGGTTT TCCGGTGAAT GAAACCAACC GTTTAGGTTT TAGTCTTGGT TGGGAGAATA ACAATATTTC ACAATTAAAG TCCTATGAGC AATTACAGCA ATTTTGGGAT ATTTATAACT CTCAGTTAGC GTCCGACGGC TCAGCAACAT TTCAGAACTT TGATATCTCC GCTAATTGGA CAAGAAATAA TTTAGATAAA GGACAGTTAG CGACACAGGG TACGAAGCAT TCTTTATGGA GTAAAATTAC GGTTCCTGGT TCTGATCTAC AGTATTTTAA AATTAATTTT AATATTAGTC ATTATCAGCG CATTACCGAT TCGGGGGATT GGACGACTTT ATTAAGAGCC TCGGGGGGAT ACGGAAACGG TTATGGACAA CTTGAAGGTA ATGATCAAAT TTTACCTTTC TTTGAAAATT ATTATGTTGG CGGCTATCGG ACCCTGCGCG GTTTCGCGAG TAATACTGTA GGTCCTCGTG CTATGTATGT CAGCAATGGC AATGTATCAT TAACCGATAA TGCAGTGGGT GGTAACGCCA AATATACCCT CAGTGGCGAA GTGATTTTCC CCGTCCCCTT TTTAGATGAG GCTTATGCAA GGCAGGCGCG AACAAGCTTA TTTGTTGACG CGGGCGAGGC ATGGGACACG GAGTTTAATA ATGATTATTA CAGCCAGCTA GGGTGTGTAT CTAATTGTGA TTATTTTTCC GATTACTCAA AACCCGGTCA GATTCGTGTT TCAGCAGGTA CTCAAATCAC TTGGGTATCG CCAATGGGAC CGTTAATCTT CACACTGGCA TGGCCTTTAA TCGAGTATGA GGGCGATCAA ACTGAAATTT TCTCATTTAA TATCGGTGAA ACTTTCTAA
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Protein sequence | MIKKFLLTGA LIIGSCISGF SFAEKFTVSD LQFEGLQRVT LGAALLSLPI REGDAVDDYT LGKALKQLYA SSYFESIELL RQGDVLIFKV KERPTISNVE LSGNKKLSEE QIFDSLKSSA LKVGESLDRT TLSGIEKSLE DFYHSVGKYS AKVETVVTAL PRNRVSIKFR FKEGRTAKIE QINIVGNNAF TDQDLLKRLT LSDSGGWWDF FADDSYQKQK LAGDLEVIKS YYLDRGYIRF SIDESQVALT PDKKGVYVTV NINEGKIYSV SDVKFIGNLL GYDDDIASLV PFKRGDTYAA SDITFAEQSI RKYFGRLGYA YPEITTYPEV NDATNTVAIS FSVDPGSRGY VRHINISGNT TTKDVVIRRE MRQMEGGWLS SENIETSKSR LNRLGFFSKI NINTERVSDD LVDLNLNVEE QASGSFNAGI GYGTESGMSL TAGVQQNNFL GSGDKVGFEV KTNQYNLSAN VNYTTPYLTK DGVSAGGRLF YDKFEAGDAN IVDYTNTTYG VRLNSGFPVN ETNRLGFSLG WENNNISQLK SYEQLQQFWD IYNSQLASDG SATFQNFDIS ANWTRNNLDK GQLATQGTKH SLWSKITVPG SDLQYFKINF NISHYQRITD SGDWTTLLRA SGGYGNGYGQ LEGNDQILPF FENYYVGGYR TLRGFASNTV GPRAMYVSNG NVSLTDNAVG GNAKYTLSGE VIFPVPFLDE AYARQARTSL FVDAGEAWDT EFNNDYYSQL GCVSNCDYFS DYSKPGQIRV SAGTQITWVS PMGPLIFTLA WPLIEYEGDQ TEIFSFNIGE TF
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