| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2967 |
|---|
| Symbol | |
|---|
| ID | 4624771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 3658644 |
|---|
| End bp | 3659156 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639798085 |
|---|
| Product | outer membrane chaperone Skp (OmpH) |
|---|
| Protein accession | YP_944268 |
|---|
| Protein GI | 119946588 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2825] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.939427 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.289934 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGT TTTTTAAAGC AGTGACATTA GCCGCAACAT TGATTTTCGT TCCCTATACG
ACAGCGGTAC AGGCAGCACA AAAAATTGCC GTGGTATACC CGTCAAAAAT TATGCAAGAA
TCTCCGCAAC GGAACAAGAT TATTAAAAAA TTAGAAGATG AGTTCAAGGG CCGTTATCAA
GCTCTGCAGC TATTAGAAAG CGAAATTAAG AAATTAGAAA AAGCAGTTCA GCGTGATGCT
GAATTATTAG GTAAAGACAA AGTGACCGCG ATGAAACGTG AGATTGAGGT TAAAGTCTCT
GAGTACAAAT TAAAACGTAA GGCATTTGAA GAGGATAATC GTCGTCGTCA AGGCGAAGAG
CAACAAGAGG CCTTAATGGT ACTGCGTGAG GTTATTAATG ATATCGCCGC ACAAGATGAT
TACGATATTA TTCTTAATGG CGAGCAAATT GTTTTTTCTA AACCAGCACT TGATATATCC
GAGCGTGTTA TTAAAGAAAT CAGCAAAAAG TAG
|
|---|
| Protein sequence | MKTFFKAVTL AATLIFVPYT TAVQAAQKIA VVYPSKIMQE SPQRNKIIKK LEDEFKGRYQ
ALQLLESEIK KLEKAVQRDA ELLGKDKVTA MKREIEVKVS EYKLKRKAFE EDNRRRQGEE
QQEALMVLRE VINDIAAQDD YDIILNGEQI VFSKPALDIS ERVIKEISKK
|
|---|
| |