Gene Ping_2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2938 
Symbol 
ID4623646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3622659 
End bp3623477 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content43% 
IMG OID639798056 
Producthypothetical protein 
Protein accessionYP_944239 
Protein GI119946559 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.436865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTT CAAATGAACT GTTATTTGTC ATCCTTAGTT TAATGGCGAC AGGCTGTTTA 
GCCGGATTTT TAGCGGGTCT GCTTGGTGTA GGAGGGGGCA TAATAATAGT CCCTGTATTA
TTTTTTGTTT TTCAAGTGAT AGGTGTTAGC CCTGAAACGG CAATGCCTAT TGCTACCGCA
ACCTCACTCG CTACCATGGT TTTTACCTCC CTTAGTTCTA TTCGTGCCCA TATTAAAAGA
GGAAATGTAG ATTTACCCCT GCTTAAAATC CTCGCACCCT TTGTGATTAT GGGAGTGCTC
GCAGGCTCTG TGATAGTGAC TCAAATTAAT GGTTTGTGGT TAAGCGGATT ATTTGGTTTT
ATTGCGATCA TTGCCGCCTT GAATATGATT TTAAGAGCAG GCGCCAAACC TCTGGCCACT
AAATTACCCG GCACGCCGGG TAAAGGTGTA ATGGCTGGAA CTATTGGCTT TTTAAGCGTG
ATGGTTGGGA TTGGCGGCGG AACCCTAACG GTGCCCAGTT TAACGGCCTT TAGTTATCCT
ATGCATAAAG CCGTGGGAAC TGCTGCTGCA GTGGGATTTT TAATTGCTTT TCCAGGGGCG
CTAAGTCTAT TAATTATTGG TGAATCAGCA GCTGATGCCC CGCCTATGAC CTATGGTTTA
GTGAACTTGT TAGCTTGTTT TTTTCTTATT CCTTTAACGG TGTTTTTTGC TCCAATCGGT
GCTCGCGTAT CATCTTACTT GGATGCTAAG TTATTAAAGC GTATTTTCGC CATTAGCCTT
ATCATCACAG GGTTACGTAT GTTATTGCAG GTTTTTTAA
 
Protein sequence
MEFSNELLFV ILSLMATGCL AGFLAGLLGV GGGIIIVPVL FFVFQVIGVS PETAMPIATA 
TSLATMVFTS LSSIRAHIKR GNVDLPLLKI LAPFVIMGVL AGSVIVTQIN GLWLSGLFGF
IAIIAALNMI LRAGAKPLAT KLPGTPGKGV MAGTIGFLSV MVGIGGGTLT VPSLTAFSYP
MHKAVGTAAA VGFLIAFPGA LSLLIIGESA ADAPPMTYGL VNLLACFFLI PLTVFFAPIG
ARVSSYLDAK LLKRIFAISL IITGLRMLLQ VF