| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2916 |
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| Symbol | |
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| ID | 4624439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 3598971 |
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| End bp | 3599771 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639798035 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_944218 |
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| Protein GI | 119946538 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.28852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAAA AATATTCACA AAATTTTCCC AGTCTTTCGC TCACCCGATC ACAAGTCGTC
TTTAGGATTG CTGGTATTGT TTTGGTTATT GAATTTATGG TGATGTTAAT CATTGGACAT
TATCATAACA ACTTAAATAT CTATGCTGAA GCTATATTGG ATGTGGCTCT GTTAACATTA
TTCAGTACGC CATTTATTTT CTACTGGGTT ATAAAACCTT TTGTTGATGA AAGAGATGTG
ACTCTCGCGG AGCTTAGCGA TATGGCACAT TCGGATCCTT TAACTAAGTT ACCCAATCGC
CGTCACCTAG AATTGCATTT TGACCAATTC ATTGCAGGTT CCCTTAAGAA GAGTATTCGT
GGCGCACTGA TGTTGGTAGA CTTAGATGGT TTTAAATTAA TAAATGATAT CTATGGACAC
GATGCCGGTG ATGCGGTTCT TATTGAGGTT GCATTACGCC TAAACGCGAC CGTTCGTGAA
GAAGATATTG TGAGTAGATT GGGCGGCGAT GAATTTGTGA TTCTGATACA CCATATTAAC
AGTGTTGAAT CTTCCGCAAC CGACACTATT TCAGGTATTG CAGAAAAGTT GGTTAAGATA
ATTATGGAAC CAATTGATTA TAAAGGTAAC AAATTGCAAG TTGGAGCAAG CATTGGGGTA
CGGATGCTCG AATTTGAAGA AATCGATACG GAAACACTTA TTCAAGATGC TGATAAAGCA
ATGTATCATG CCAAGCAGGC AGGTAAAGGA CGAGCAGTCT TTTTTGAAGA AATAGATCAG
GCAACTCCAA TACACAATTA A
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| Protein sequence | MNKKYSQNFP SLSLTRSQVV FRIAGIVLVI EFMVMLIIGH YHNNLNIYAE AILDVALLTL
FSTPFIFYWV IKPFVDERDV TLAELSDMAH SDPLTKLPNR RHLELHFDQF IAGSLKKSIR
GALMLVDLDG FKLINDIYGH DAGDAVLIEV ALRLNATVRE EDIVSRLGGD EFVILIHHIN
SVESSATDTI SGIAEKLVKI IMEPIDYKGN KLQVGASIGV RMLEFEEIDT ETLIQDADKA
MYHAKQAGKG RAVFFEEIDQ ATPIHN
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