Gene Ping_2911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2911 
Symbol 
ID4625211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3593700 
End bp3594710 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content41% 
IMG OID639798031 
ProductABC alpha-glucoside transporter inner membrane binding protein 
Protein accessionYP_944214 
Protein GI119946534 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.306248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAT TATATTACTC CTTACTGGTT ATGCTACTGG GTGTTTTAGG TTGTGTTTTT 
TATTTTTTTG GTAGTAACTG GTTGTTGATC ATAATGTTCC CAATCAACCA TGTTTCCAAC
GAAAAGATGG CAAAAAACAT TCGCCGGGCA GCAGCCATCC GGCCTTGGTT ATTTTTAGGT
CCCGCCTTGT TTTTTCTTGG TTTATATCTT GTTTATCCGG TCTTTGATTC AGTGTATTTG
TCATTACACG GACGCAATGG CGAAGATTTT GTTGGATTAG CTAATTATCA ATGGCTATTT
AACGACAATG AATTTATTGA GAGTTTAATC AATAACGTAA TGTGGTTATT GATTGTACCC
GCATTATCCA CATTTTTTGG TTTGATTATT GCCGCGCTCA CGGATCGTAT TCGTTGGGGA
AATATTGCCA AAAGTCTTAT TTTCATGCCC ATGGCAATCT CTTTTATCGG TGCTTCTATT
ATCTGGAAAT TTGTTTATGA TTACCGCGCC GAAGGCTCTG ATCAAATTGG TCTGCTTAAT
GCGCTAGTGG TCTATTTTGG TGGCACACCA CAAGCCTGGA TAACTATCCC ATTTTGGAAT
GATATTTTAT TAATGGTGAT TTTGATTTGG ATCCAAACGG GTTTTGCCAT GGTGATTTTA
TCAGCTGCAC TGCGTGGTAT TCCGGAGGAA ACCGTAGAAG CTGCCGTATT AGACGGGGCC
AATGGCATAC AGATTTTCTT CAAAATTCTT ATCCCGCAAA TTTGGGGATC GATTGCCGTG
GTATGGACCA CTATCACTAT TTTAGTGCTT AAAGTCTTTG ATATCGTTTT AGCCATGACC
AACGGTCAAT GGGACACCCA AGTATTGGCC AACATGATGT TTGACTGGAT GTTTAGAGGC
GGCGGTGATT TTGGCCGTGG CGCGGCGATA GCGGTGATTA TCATGATTGC GGTTATTCCG
GTGATGGTTT GGAATGTTAG ACAGGCAAAT GCACAAATGG AAGGACGTTA A
 
Protein sequence
MEQLYYSLLV MLLGVLGCVF YFFGSNWLLI IMFPINHVSN EKMAKNIRRA AAIRPWLFLG 
PALFFLGLYL VYPVFDSVYL SLHGRNGEDF VGLANYQWLF NDNEFIESLI NNVMWLLIVP
ALSTFFGLII AALTDRIRWG NIAKSLIFMP MAISFIGASI IWKFVYDYRA EGSDQIGLLN
ALVVYFGGTP QAWITIPFWN DILLMVILIW IQTGFAMVIL SAALRGIPEE TVEAAVLDGA
NGIQIFFKIL IPQIWGSIAV VWTTITILVL KVFDIVLAMT NGQWDTQVLA NMMFDWMFRG
GGDFGRGAAI AVIIMIAVIP VMVWNVRQAN AQMEGR