Gene Ping_2910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2910 
Symbol 
ID4625210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3592272 
End bp3593630 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content43% 
IMG OID639798030 
ProductABC alpha-glucoside transporter extracellular solute-binding protein, family 1 
Protein accessionYP_944213 
Protein GI119946533 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.320115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA AGATACTCAA TAGCGCGATT GCTCTGGCAA TTCTTACCTC TTCATCCGCT 
TTTGCAGATG ATTTAAAATT CCAACCCGGT GAAGACAACA CCTTTAACTG GGCAAGTTAT
GAGCAATTTA AAAAAGACGT TAACTTAAAA GGACAAAAAC TAACTATTAA AGGACCATGG
CTAGGGGCGG ATAAAGATCT CGCCGAAAGT GTGATTGCTT ATTTTGAAGC GGCAACGGGT
GCTGACGTAG AATATGCAGG ATCAGATTCT TTTGAACAAC AAATTGTGAT TGATGTTCAG
GCAGGCAGCG CACCTAATAT TGCTATTTTC CCACAACCCG GCTTAGCCGC TGACCTTGCA
TCAAAAGGGT TTTTATCACC ACTCAGTGCT GATACGGAAA AATGGGTGAA AGAAAATTAT
GCAGCAGGAT CATCATGGGT CGATCTGGGT ACTTTTACCG ATAAAAAAGG CAATAAAAAT
TTATTTGGTT TCTTTTATAA AGTTGATTTG AAATCACTGG TTTGGTTTAT CCCTGAAAAT
TTTGAAGATG CAGGCTATGA AATCCCCAAA ACGATGGAAG AATTAAAAGG ATTAACCAAG
CAGATTGTTG CCGATGGCGG AACGCCTTGG TGTATTGGTC TGGGAAGCGG CGCTGCAACA
GGTTGGCCAG CAACCGATTG GGTTGAAGAT TTAATGTTAA GAACGCAGTC ACCCGAGGAT
TATGATCGCT GGGTAAGCAA TGATTTGAAA TTTAACGATC CTAAAGTTGT GCAGGCCATT
GAAGAGTTTG GTTGGTTTGC CGGTAATGAT AAATTTGTTG ATGGTGGCGC CCGTGCTGTC
GCCACCTCTG ATTTCCGTGA AAGTCCGCTT GGTCTGTTTA GCTCTCCTGC TAAATGTTAT
ATGCACAGAC AAGCCTCGTT TATTCCAAGC TTCTTCCCTG AAGGAACAAA ACTGGGTCTC
GATGCCGACT TCTTTTACTT CCCAGCTTAT GCGTCTAAAG ATCTGGGTAA ACCGGTCTTA
GGTGCAGGTA CTATGTGGGG CATCACCGAT GACTCAAAAG CAGCGCAAGC CTTTATTGCC
TTCCTGCAAA CACCTATCGC CCATGAAATT TGGATGGCGC AATCAGGTTT CTTAACACCT
TATAAAGGGG TTAATATCAA CGCCTATGGT AATGATACAC TGAAAAAACA GGGTAAGATT
TTACTGGATG CAACCACCTT CCGTTTTGAC GGCTCAGACT TAATGCCCGG CAAAATTGGT
GCAGGTGCAT TCTGGACCGG TATGGTTGAT TACACGGGTG GTAAATCAGC GCAAGAAGTA
GGTAACAACA TTCAAGCAAC GTGGGATGCG CTTAAATAA
 
Protein sequence
MKNKILNSAI ALAILTSSSA FADDLKFQPG EDNTFNWASY EQFKKDVNLK GQKLTIKGPW 
LGADKDLAES VIAYFEAATG ADVEYAGSDS FEQQIVIDVQ AGSAPNIAIF PQPGLAADLA
SKGFLSPLSA DTEKWVKENY AAGSSWVDLG TFTDKKGNKN LFGFFYKVDL KSLVWFIPEN
FEDAGYEIPK TMEELKGLTK QIVADGGTPW CIGLGSGAAT GWPATDWVED LMLRTQSPED
YDRWVSNDLK FNDPKVVQAI EEFGWFAGND KFVDGGARAV ATSDFRESPL GLFSSPAKCY
MHRQASFIPS FFPEGTKLGL DADFFYFPAY ASKDLGKPVL GAGTMWGITD DSKAAQAFIA
FLQTPIAHEI WMAQSGFLTP YKGVNINAYG NDTLKKQGKI LLDATTFRFD GSDLMPGKIG
AGAFWTGMVD YTGGKSAQEV GNNIQATWDA LK